52 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108279885	Clathrin coat assembly protein AP180-like isoform X3. (228 aa)
	fnbp1l	Formin-binding protein 1-like isoform X1. (551 aa)
	gak	cyclin-G-associated kinase isoform X2. (1287 aa)
	LOC108280370	Clathrin coat assembly protein AP180-like isoform X2. (566 aa)
	LOC108269110	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like isoform X8. (1248 aa)
	fcho2	F-BAR domain only protein 2 isoform X1. (964 aa)
	slamf6	SLAM family member 6. (551 aa)
	ap2a1	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (946 aa)
	fcgr2a	Low affinity immunoglobulin gamma Fc region receptor II-a isoform X1. (422 aa)
	picalm	Phosphatidylinositol-binding clathrin assembly protein isoform X6. (633 aa)
	dnajc6	Putative tyrosine-protein phosphatase auxilin isoform X1. (894 aa)
	sgip1	SH3-containing GRB2-like protein 3-interacting protein 1 isoform X9. (845 aa)
	LOC108258431	B-cell receptor CD22-like. (183 aa)
	ENSIPUP00000013189	annotation not available (308 aa)
	LOC108258435	B-cell receptor CD22-like isoform X1. (389 aa)
	LOC108259396	Sialoadhesin-like isoform X2. (706 aa)
	ENSIPUP00000015071	B-cell receptor CD22-like. (261 aa)
	LOC108258743	B-cell receptor CD22-like isoform X1. (436 aa)
	ENSIPUP00000015189	annotation not available (396 aa)
	LOC108258759	B-cell receptor CD22-like isoform X1. (398 aa)
	LOC108258767	B-cell receptor CD22-like. (439 aa)
	LOC108258770	B-cell receptor CD22-like isoform X4. (299 aa)
	LOC108258734	B-cell receptor CD22-like isoform X2. (410 aa)
	ENSIPUP00000015591	annotation not available (383 aa)
	ENSIPUP00000015626	annotation not available (397 aa)
	ENSIPUP00000015675	annotation not available (126 aa)
	ENSIPUP00000015690	annotation not available (279 aa)
	LOC108267679	AP-2 complex subunit mu-A-like isoform X1; Belongs to the adaptor complexes medium subunit family. (435 aa)
	LOC108259415	Sialoadhesin-like isoform X1. (557 aa)
	LOC108259407	Sialoadhesin-like isoform X1. (623 aa)
	LOC108259173	Sialoadhesin-like. (438 aa)
	LOC108259411	Pregnancy-specific beta-1-glycoprotein 2-like isoform X2. (216 aa)
	LOC108267185	SH3-containing GRB2-like protein 3-interacting protein 1. (719 aa)
	itsn2	LOW QUALITY PROTEIN: intersectin-2. (528 aa)
	ENSIPUP00000019729	annotation not available (131 aa)
	LOC108259418	Sialoadhesin-like. (519 aa)
	ENSIPUP00000019864	annotation not available (1059 aa)
	LOC108259384	Sialoadhesin-like. (595 aa)
	LOC108264350	AP-2 complex subunit mu-B. (438 aa)
	LOC108269989	Intersectin-2-like isoform X1. (1695 aa)
	LOC108278317	Phosphatidylinositol-binding clathrin assembly protein-like isoform X5. (696 aa)
	LOC108264992	F-BAR domain only protein 1-like isoform X1. (1122 aa)
	cltc	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1677 aa)
	cltb	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (223 aa)
	ap2a2	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (944 aa)
	itsn1	Intersectin-1 isoform X2. (1526 aa)
	inpp5f	Phosphatidylinositide phosphatase SAC2 isoform X2. (1127 aa)
	clta	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (234 aa)
	LOC108267499	Phosphatidylinositol-binding clathrin assembly protein-like. (646 aa)
	ap2s1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (147 aa)
	LOC108278489	Phosphatidylinositol-binding clathrin assembly protein-like isoform X1. (558 aa)
	LOC108279726	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like isoform X3. (1372 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSIPUP00000019729	LOC108264350	ENSIPUP00000019729	ENSIPUP00000020061	annotation not available	AP-2 complex subunit mu-B.	0.994
ENSIPUP00000019729	LOC108264992	ENSIPUP00000019729	ENSIPUP00000021969	annotation not available	F-BAR domain only protein 1-like isoform X1.	0.987
ENSIPUP00000019729	LOC108267185	ENSIPUP00000019729	ENSIPUP00000019626	annotation not available	SH3-containing GRB2-like protein 3-interacting protein 1.	0.987
ENSIPUP00000019729	LOC108267499	ENSIPUP00000019729	ENSIPUP00000033795	annotation not available	Phosphatidylinositol-binding clathrin assembly protein-like.	0.969
ENSIPUP00000019729	LOC108267679	ENSIPUP00000019729	ENSIPUP00000018897	annotation not available	AP-2 complex subunit mu-A-like isoform X1; Belongs to the adaptor complexes medium subunit family.	0.994
ENSIPUP00000019729	LOC108269989	ENSIPUP00000019729	ENSIPUP00000020654	annotation not available	Intersectin-2-like isoform X1.	0.954
ENSIPUP00000019729	LOC108278317	ENSIPUP00000019729	ENSIPUP00000021067	annotation not available	Phosphatidylinositol-binding clathrin assembly protein-like isoform X5.	0.969
ENSIPUP00000019729	LOC108278489	ENSIPUP00000019729	ENSIPUP00000036118	annotation not available	Phosphatidylinositol-binding clathrin assembly protein-like isoform X1.	0.969
ENSIPUP00000019729	LOC108279885	ENSIPUP00000019729	ENSIPUP00000001409	annotation not available	Clathrin coat assembly protein AP180-like isoform X3.	0.969
ENSIPUP00000019729	LOC108280370	ENSIPUP00000019729	ENSIPUP00000006992	annotation not available	Clathrin coat assembly protein AP180-like isoform X2.	0.969
ENSIPUP00000019729	ap2a1	ENSIPUP00000019729	ENSIPUP00000009719	annotation not available	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.971
ENSIPUP00000019729	ap2a2	ENSIPUP00000019729	ENSIPUP00000026518	annotation not available	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.971
ENSIPUP00000019729	ap2s1	ENSIPUP00000019729	ENSIPUP00000034411	annotation not available	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.994
ENSIPUP00000019729	clta	ENSIPUP00000019729	ENSIPUP00000033043	annotation not available	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.973
ENSIPUP00000019729	cltb	ENSIPUP00000019729	ENSIPUP00000024404	annotation not available	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.973
ENSIPUP00000019729	cltc	ENSIPUP00000019729	ENSIPUP00000023082	annotation not available	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.986
ENSIPUP00000019729	fcho2	ENSIPUP00000019729	ENSIPUP00000008750	annotation not available	F-BAR domain only protein 2 isoform X1.	0.987
ENSIPUP00000019729	fnbp1l	ENSIPUP00000019729	ENSIPUP00000001694	annotation not available	Formin-binding protein 1-like isoform X1.	0.796
ENSIPUP00000019729	gak	ENSIPUP00000019729	ENSIPUP00000001788	annotation not available	cyclin-G-associated kinase isoform X2.	0.812
ENSIPUP00000019729	itsn1	ENSIPUP00000019729	ENSIPUP00000029900	annotation not available	Intersectin-1 isoform X2.	0.947