22 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nf1	Neurofibromin isoform X5. (2745 aa)
	LOC108267538	Bcl2-associated agonist of cell death-like. (145 aa)
	gsk3a	Glycogen synthase kinase-3 alpha isoform X1; Belongs to the protein kinase superfamily. (440 aa)
	LOC108268142	Induced myeloid leukemia cell differentiation protein Mcl-1-like. (253 aa)
	casp2	LOW QUALITY PROTEIN: caspase-2; Belongs to the peptidase C14A family. (439 aa)
	bok	Bcl-2-related ovarian killer protein. (214 aa)
	bcl2l1	Bcl-2-like protein 1. (242 aa)
	fadd	FAS-associated death domain protein. (210 aa)
	LOC108270970	Apoptosis regulator BAX-like. (202 aa)
	LOC108258646	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily. (422 aa)
	BAX	BCL2 associated X, apoptosis regulator. (176 aa)
	bax	Apoptosis regulator BAX. (189 aa)
	LOC108264502	Anti-apoptotic protein NR13-like. (178 aa)
	LOC108274750	Apoptosis regulator BAX-like. (199 aa)
	ENSIPUP00000025403	annotation not available (128 aa)
	LOC108278148	Bcl-2-related ovarian killer protein homolog B-like. (197 aa)
	bcl2l11	Bcl-2-like protein 11 isoform X2. (221 aa)
	LOC108268551	Anti-apoptotic protein NR13-like. (178 aa)
	bag3	BAG family molecular chaperone regulator 3 isoform X1. (531 aa)
	LOC108276969	Neurofibromin isoform X3. (2756 aa)
	LOC108274846	Induced myeloid leukemia cell differentiation protein Mcl-1-like. (258 aa)
	gsk3b	Glycogen synthase kinase-3 beta isoform X2; Belongs to the protein kinase superfamily. (421 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAX	LOC108267538	ENSIPUP00000022885	ENSIPUP00000005821	BCL2 associated X, apoptosis regulator.	Bcl2-associated agonist of cell death-like.	0.696
BAX	LOC108270970	ENSIPUP00000022885	ENSIPUP00000021392	BCL2 associated X, apoptosis regulator.	Apoptosis regulator BAX-like.	0.656
BAX	bcl2l1	ENSIPUP00000022885	ENSIPUP00000020079	BCL2 associated X, apoptosis regulator.	Bcl-2-like protein 1.	0.456
BAX	bcl2l11	ENSIPUP00000022885	ENSIPUP00000027147	BCL2 associated X, apoptosis regulator.	Bcl-2-like protein 11 isoform X2.	0.871
ENSIPUP00000025403	LOC108267538	ENSIPUP00000025403	ENSIPUP00000005821	annotation not available	Bcl2-associated agonist of cell death-like.	0.696
ENSIPUP00000025403	LOC108270970	ENSIPUP00000025403	ENSIPUP00000021392	annotation not available	Apoptosis regulator BAX-like.	0.639
ENSIPUP00000025403	bcl2l1	ENSIPUP00000025403	ENSIPUP00000020079	annotation not available	Bcl-2-like protein 1.	0.481
ENSIPUP00000025403	bcl2l11	ENSIPUP00000025403	ENSIPUP00000027147	annotation not available	Bcl-2-like protein 11 isoform X2.	0.871
LOC108258646	gsk3b	ENSIPUP00000022541	ENSIPUP00000035615	Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily.	Glycogen synthase kinase-3 beta isoform X2; Belongs to the protein kinase superfamily.	0.900
LOC108264502	LOC108267538	ENSIPUP00000024401	ENSIPUP00000005821	Anti-apoptotic protein NR13-like.	Bcl2-associated agonist of cell death-like.	0.802
LOC108264502	bcl2l1	ENSIPUP00000024401	ENSIPUP00000020079	Anti-apoptotic protein NR13-like.	Bcl-2-like protein 1.	0.434
LOC108264502	bcl2l11	ENSIPUP00000024401	ENSIPUP00000027147	Anti-apoptotic protein NR13-like.	Bcl-2-like protein 11 isoform X2.	0.878
LOC108267538	BAX	ENSIPUP00000005821	ENSIPUP00000022885	Bcl2-associated agonist of cell death-like.	BCL2 associated X, apoptosis regulator.	0.696
LOC108267538	ENSIPUP00000025403	ENSIPUP00000005821	ENSIPUP00000025403	Bcl2-associated agonist of cell death-like.	annotation not available	0.696
LOC108267538	LOC108264502	ENSIPUP00000005821	ENSIPUP00000024401	Bcl2-associated agonist of cell death-like.	Anti-apoptotic protein NR13-like.	0.802
LOC108267538	LOC108268142	ENSIPUP00000005821	ENSIPUP00000010331	Bcl2-associated agonist of cell death-like.	Induced myeloid leukemia cell differentiation protein Mcl-1-like.	0.683
LOC108267538	LOC108268551	ENSIPUP00000005821	ENSIPUP00000027965	Bcl2-associated agonist of cell death-like.	Anti-apoptotic protein NR13-like.	0.802
LOC108267538	LOC108270970	ENSIPUP00000005821	ENSIPUP00000021392	Bcl2-associated agonist of cell death-like.	Apoptosis regulator BAX-like.	0.787
LOC108267538	LOC108274750	ENSIPUP00000005821	ENSIPUP00000025129	Bcl2-associated agonist of cell death-like.	Apoptosis regulator BAX-like.	0.696
LOC108267538	LOC108274846	ENSIPUP00000005821	ENSIPUP00000033250	Bcl2-associated agonist of cell death-like.	Induced myeloid leukemia cell differentiation protein Mcl-1-like.	0.683