STRINGSTRING
ENSIPUP00000004727 ENSIPUP00000004727 LOC108255212 LOC108255212 plaa plaa trip12 trip12 ubr5 ubr5 otub1-2 otub1-2 parp10 parp10 otub2 otub2 sash1 sash1 otub1 otub1 LOC108270447 LOC108270447
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSIPUP00000004727annotation not available (151 aa)
LOC108255212Ubiquitin-conjugating enzyme E2 variant 1. (147 aa)
plaaPhospholipase A-2-activating protein. (797 aa)
trip12E3 ubiquitin-protein ligase TRIP12. (2073 aa)
ubr5E3 ubiquitin-protein ligase UBR5 isoform X4. (2425 aa)
otub1-2Ubiquitin thioesterase otub1. (269 aa)
parp10Poly [ADP-ribose] polymerase. (1177 aa)
otub2Coiled-coil domain-containing protein 42 homolog isoform X1. (595 aa)
sash1SAM and SH3 domain-containing protein 1 isoform X2. (1171 aa)
otub1Ubiquitin thioesterase OTUB1. (266 aa)
LOC108270447SAM and SH3 domain-containing protein 1-like isoform X1. (1027 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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