STRINGSTRING
rbck1 rbck1 CCN3 CCN3 LOC108265141 LOC108265141 LOC108273944 LOC108273944 LOC108275733 LOC108275733 nmi nmi LOC108263783 LOC108263783 ppm1a ppm1a ENSIPUP00000004727 ENSIPUP00000004727 LOC108270447 LOC108270447 ptp4a3 ptp4a3 LOC108275773 LOC108275773 sash1 sash1 LOC108275399 LOC108275399 LOC108271977 LOC108271977 c7h20orf27 c7h20orf27 LOC108273990 LOC108273990 LOC108256756 LOC108256756 nod1 nod1 LOC108267889 LOC108267889 ppm1b ppm1b ifi35 ifi35 LOC108271072 LOC108271072 LOC108260805 LOC108260805 LOC108257286 LOC108257286 pdcd4 pdcd4 LOC108258817 LOC108258817 mkrn2 mkrn2 ilk ilk il1b il1b ENSIPUP00000020164 ENSIPUP00000020164 il1b-2 il1b-2 LOC108270415 LOC108270415 LOC108257537 LOC108257537 LOC108270067 LOC108270067 LOC108273546 LOC108273546 nod2 nod2 cyld cyld LOC108259822 LOC108259822 LOC108274760 LOC108274760 ccdc142 ccdc142 LOC108272862 LOC108272862 LOC108272580 LOC108272580 LOC108264201 LOC108264201 LOC108258036 LOC108258036 tspan6 tspan6 lrrc19 lrrc19 LOC108264820 LOC108264820 uaca uaca eif2ak2 eif2ak2 LOC108255518 LOC108255518 LOC108255519 LOC108255519 LOC108276736 LOC108276736 LOC108277626 LOC108277626 LOC108272987 LOC108272987 tcim tcim LOC108261706 LOC108261706 LOC108272975 LOC108272975 LOC108264780 LOC108264780 phb phb grem1 grem1 c1qtnf4 c1qtnf4 trim44 trim44 rc3h1 rc3h1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbck1ranBP-type and C3HC4-type zinc finger-containing protein 1. (513 aa)
CCN3Protein NOV-like. (315 aa)
LOC108265141Basic salivary proline-rich protein 2-like isoform X1. (122 aa)
LOC108273944Histone acetyltransferase p300-like isoform X6. (2631 aa)
LOC108275733NACHT, LRR and PYD domains-containing protein 12-like isoform X2. (1189 aa)
nmiN-myc-interactor. (384 aa)
LOC108263783Programmed cell death protein 4-like isoform X1. (469 aa)
ppm1aProtein phosphatase 1A isoform X2. (377 aa)
ENSIPUP00000004727annotation not available (151 aa)
LOC108270447SAM and SH3 domain-containing protein 1-like isoform X1. (1027 aa)
ptp4a3Protein tyrosine phosphatase type IVA 3. (173 aa)
LOC108275773Uncharacterized protein LOC108275773. (443 aa)
sash1SAM and SH3 domain-containing protein 1 isoform X2. (1171 aa)
LOC108275399Ribonuclease ZC3H12A-like. (623 aa)
LOC108271977Ubiquitin carboxyl-terminal hydrolase CYLD-like; Belongs to the peptidase C19 family. (729 aa)
c7h20orf27UPF0687 protein C20orf27 homolog. (176 aa)
LOC108273990Protein phosphatase 1B-like isoform X1. (463 aa)
LOC108256756Tumor necrosis factor ligand superfamily member 14-like; Belongs to the tumor necrosis factor family. (248 aa)
nod1Nucleotide-binding oligomerization domain-containing protein 1. (946 aa)
LOC108267889Roquin-1-like isoform X2. (1118 aa)
ppm1bProtein phosphatase 1B. (433 aa)
ifi35Interferon-induced 35 kDa protein. (371 aa)
LOC108271072Nuclear factor of activated T-cells 5-like isoform X1. (1241 aa)
LOC108260805Ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1. (954 aa)
LOC108257286Protein NLRC3-like. (1051 aa)
pdcd4Programmed cell death protein 4. (467 aa)
LOC108258817Tumor necrosis factor ligand superfamily member 6-like; Belongs to the tumor necrosis factor family. (234 aa)
mkrn2Probable E3 ubiquitin-protein ligase makorin-2 isoform X2. (416 aa)
ilkIntegrin-linked protein kinase. (452 aa)
il1bInterleukin-1. (280 aa)
ENSIPUP00000020164annotation not available (180 aa)
il1b-2Interleukin-1. (280 aa)
LOC108270415Gremlin-2-like. (195 aa)
LOC108257537Complement C1q-like protein 3. (216 aa)
LOC108270067Ribonuclease ZC3H12A-like. (605 aa)
LOC108273546NACHT, LRR and PYD domains-containing protein 12-like. (1349 aa)
nod2Nucleotide-binding oligomerization domain-containing protein 2. (981 aa)
cyldUbiquitin carboxyl-terminal hydrolase CYLD; Belongs to the peptidase C19 family. (768 aa)
LOC108259822ectodysplasin-A-like; Belongs to the tumor necrosis factor family. (290 aa)
LOC108274760Nuclear factor of activated T-cells 5-like isoform X2. (1446 aa)
ccdc142Coiled-coil domain-containing protein 142 isoform X2. (1025 aa)
LOC108272862NACHT, LRR and PYD domains-containing protein 3-like. (1258 aa)
LOC108272580Protein tyrosine phosphatase type IVA 3-like. (173 aa)
LOC108264201Complement C1q tumor necrosis factor-related protein 4-like isoform X1. (357 aa)
LOC108258036Protein phosphatase 1A-like isoform X2. (444 aa)
tspan6Tetraspanin. (251 aa)
lrrc19Leucine-rich repeat-containing protein 19. (335 aa)
LOC108264820LOW QUALITY PROTEIN: A-kinase-interacting protein 1-like. (234 aa)
uacaUveal autoantigen with coiled-coil domains and ankyrin repeats isoform X1. (1376 aa)
eif2ak2Interferon-induced, double-stranded RNA-activated protein kinase isoform X2. (679 aa)
LOC108255518C-C motif chemokine 19-like isoform X1. (115 aa)
LOC108255519C-C motif chemokine. (110 aa)
LOC108276736Roquin-2-like. (1034 aa)
LOC108277626Protein phosphatase 1A-like. (438 aa)
LOC108272987Uncharacterized protein LOC108272987. (2000 aa)
tcimProtein C8orf4 homolog. (100 aa)
LOC108261706Uncharacterized protein LOC108261706. (2221 aa)
LOC108272975Histone acetyltransferase p300-like isoform X2. (2494 aa)
LOC108264780Uveal autoantigen with coiled-coil domains and ankyrin repeats-like. (55 aa)
phbProhibitin. (279 aa)
grem1Gremlin-1 isoform X2. (176 aa)
c1qtnf4Complement C1q tumor necrosis factor-related protein 4. (300 aa)
trim44Tripartite motif-containing protein 44 isoform X2. (333 aa)
rc3h1Roquin-1 isoform X1. (1102 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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