STRINGSTRING
LOC108258036 LOC108258036 CCN3 CCN3 LOC108275733 LOC108275733 nmi nmi ppm1a ppm1a LOC108275399 LOC108275399 LOC108271977 LOC108271977 LOC108273990 LOC108273990 ppm1b ppm1b ifi35 ifi35 LOC108257286 LOC108257286 mkrn2 mkrn2 LOC108270067 LOC108270067 LOC108273546 LOC108273546 cyld cyld LOC108272862 LOC108272862 tspan6 tspan6 uaca uaca LOC108277626 LOC108277626 LOC108264780 LOC108264780
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108258036Protein phosphatase 1A-like isoform X2. (444 aa)
CCN3Protein NOV-like. (315 aa)
LOC108275733NACHT, LRR and PYD domains-containing protein 12-like isoform X2. (1189 aa)
nmiN-myc-interactor. (384 aa)
ppm1aProtein phosphatase 1A isoform X2. (377 aa)
LOC108275399Ribonuclease ZC3H12A-like. (623 aa)
LOC108271977Ubiquitin carboxyl-terminal hydrolase CYLD-like; Belongs to the peptidase C19 family. (729 aa)
LOC108273990Protein phosphatase 1B-like isoform X1. (463 aa)
ppm1bProtein phosphatase 1B. (433 aa)
ifi35Interferon-induced 35 kDa protein. (371 aa)
LOC108257286Protein NLRC3-like. (1051 aa)
mkrn2Probable E3 ubiquitin-protein ligase makorin-2 isoform X2. (416 aa)
LOC108270067Ribonuclease ZC3H12A-like. (605 aa)
LOC108273546NACHT, LRR and PYD domains-containing protein 12-like. (1349 aa)
cyldUbiquitin carboxyl-terminal hydrolase CYLD; Belongs to the peptidase C19 family. (768 aa)
LOC108272862NACHT, LRR and PYD domains-containing protein 3-like. (1258 aa)
tspan6Tetraspanin. (251 aa)
uacaUveal autoantigen with coiled-coil domains and ankyrin repeats isoform X1. (1376 aa)
LOC108277626Protein phosphatase 1A-like. (438 aa)
LOC108264780Uveal autoantigen with coiled-coil domains and ankyrin repeats-like. (55 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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