STRINGSTRING
LOC108275399 LOC108275399 tnip1 tnip1 nop53 nop53 tank tank LOC108270067 LOC108270067 wdr20 wdr20 LOC108277854 LOC108277854 sart3 sart3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108275399Ribonuclease ZC3H12A-like. (623 aa)
tnip1TNFAIP3-interacting protein 1 isoform X7. (643 aa)
nop53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (513 aa)
tankTRAF family member-associated NF-kappa-B activator isoform X2. (344 aa)
LOC108270067Ribonuclease ZC3H12A-like. (605 aa)
wdr20WD repeat-containing protein 20. (620 aa)
LOC108277854WD repeat-containing protein 20-like isoform X1. (650 aa)
sart3Squamous cell carcinoma antigen recognized by T-cells 3. (944 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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