STRINGSTRING
LOC108267606 LOC108267606 smad4 smad4 bmp4 bmp4 dkk1 dkk1 nkx2-5 nkx2-5 LOC108261575 LOC108261575 dhx36 dhx36 abi3bp abi3bp tgfb2 tgfb2 LOC108273360 LOC108273360 LOC108268908 LOC108268908 LOC108255640 LOC108255640 sox5 sox5 LOC108262840 LOC108262840 sox6 sox6 LOC108264167 LOC108264167
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108267606Mothers against decapentaplegic homolog. (574 aa)
smad4Mothers against decapentaplegic homolog. (546 aa)
bmp4Bone morphogenetic protein 4. (402 aa)
dkk1Dickkopf-related protein 1. (236 aa)
nkx2-5Homeobox protein Nkx-2.5. (308 aa)
LOC108261575Neuronal PAS domain-containing protein 4-like isoform X1. (603 aa)
dhx36ATP-dependent RNA helicase DHX36. (921 aa)
abi3bpTarget of Nesh-SH3 isoform X1. (1383 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (401 aa)
LOC108273360Mothers against decapentaplegic homolog. (561 aa)
LOC108268908Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
LOC108255640Mothers against decapentaplegic homolog. (523 aa)
sox5Transcription factor SOX-5. (713 aa)
LOC108262840Dickkopf-related protein 1-like. (282 aa)
sox6Transcription factor SOX-6 isoform X7. (759 aa)
LOC108264167Bone morphogenetic protein 2-like. (420 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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