STRINGSTRING
LOC108260981 LOC108260981 LOC108266333 LOC108266333 tgfb3 tgfb3 LOC108280750 LOC108280750 LOC108264585 LOC108264585 acod1 acod1 duoxa1 duoxa1 ENSIPUP00000028482 ENSIPUP00000028482 nfe2l2 nfe2l2 LOC108270067 LOC108270067 LOC108269388 LOC108269388 pid1 pid1 LOC108260470 LOC108260470 LOC108279384 LOC108279384 f2 f2 LOC108272203 LOC108272203 LOC108259423 LOC108259423 tspo tspo tgfbr2 tgfbr2 cyp1b cyp1b LOC108280806 LOC108280806 LOC108274807 LOC108274807 romo1 romo1 LOC108275399 LOC108275399
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108260981Ankyrin repeat and protein kinase domain-containing protein 1-like isoform X1; Belongs to the protein kinase superfamily. (452 aa)
LOC108266333Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (581 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
LOC108280750Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC108264585Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. (186 aa)
acod1Cis-aconitate decarboxylase. (482 aa)
duoxa1Dual oxidase maturation factor 1. (384 aa)
ENSIPUP00000028482Cytochrome P450, family 1, subfamily C, polypeptide 1. (526 aa)
nfe2l2Nuclear factor erythroid 2-related factor 2. (586 aa)
LOC108270067Ribonuclease ZC3H12A-like. (605 aa)
LOC108269388Cis-aconitate decarboxylase-like. (498 aa)
pid1PTB-containing, cubilin and LRP1-interacting protein. (214 aa)
LOC108260470RNA polymerase II degradation factor 1-like isoform X1; Belongs to the PDGF/VEGF growth factor family. (581 aa)
LOC108279384Transforming growth factor beta; Belongs to the TGF-beta family. (380 aa)
f2Prothrombin; Belongs to the peptidase S1 family. (620 aa)
LOC108272203Growth arrest and DNA damage-inducible protein GADD45 alpha-like. (210 aa)
LOC108259423Platelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (476 aa)
tspoTranslocator protein isoform X1. (161 aa)
tgfbr2TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (572 aa)
cyp1bCytochrome P450 1B1. (536 aa)
LOC108280806Growth arrest and DNA damage-inducible protein GADD45 alpha-like. (158 aa)
LOC108274807Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (542 aa)
romo1Reactive oxygen species modulator 1. (79 aa)
LOC108275399Ribonuclease ZC3H12A-like. (623 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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