48 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ndc80	Kinetochore protein NDC80 homolog. (635 aa)
	fbxo28	F-box only protein 28. (375 aa)
	LOC108278850	Transcription activator BRG1 isoform X3. (1629 aa)
	cenpn	Centromere protein N isoform X1. (387 aa)
	LOC108257430	Kinetochore-associated protein DSN1 homolog. (336 aa)
	ENSIPUP00000008118	Biorientation of chromosomes in cell division 1. (155 aa)
	cenpt	Centromere protein T. (791 aa)
	spc24	Kinetochore protein Spc24 isoform X1. (244 aa)
	cenpi	Centromere protein I. (721 aa)
	cenpw	Centromere protein W. (75 aa)
	nek2	Serine/threonine-protein kinase Nek2. (452 aa)
	LOC108268529	Centromere protein F-like. (1278 aa)
	ska1	Spindle and kinetochore-associated protein 1. (257 aa)
	LOC108257959	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1. (667 aa)
	fam43b	Protein FAM43B. (316 aa)
	spdl1	Protein Spindly; Required for the localization of dynein and dynactin to the mitotic kintochore. Dynein is believed to control the initial lateral interaction between the kinetochore and spindle microtubules and to facilitate the subsequent formation of end-on kinetochore-microtubule attachments mediated by the NDC80 complex; Belongs to the Spindly family. (579 aa)
	LOC108273301	Transcription activator BRG1-like isoform X1. (1614 aa)
	LOC108268687	Polyamine-modulated factor 1-like. (224 aa)
	ENSIPUP00000023163	annotation not available (190 aa)
	bub1	Mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1. (88 aa)
	LOC108273465	Baculoviral IAP repeat-containing protein 5.2-like. (142 aa)
	cenpv	Centromere protein V. (137 aa)
	phf2	Lysine-specific demethylase PHF2 isoform X1. (1095 aa)
	LOC108258632	Shugoshin-like 1. (658 aa)
	nuf2	Kinetochore protein Nuf2 isoform X2. (454 aa)
	mis12	Protein MIS12 homolog. (219 aa)
	cdt1	DNA replication factor Cdt1. (672 aa)
	bod1l1	Biorientation of chromosomes in cell division protein 1-like 1. (2003 aa)
	ENSIPUP00000002468	annotation not available (101 aa)
	LOC108258433	Uncharacterized protein LOC108258433 isoform X1. (344 aa)
	cenpo	Centromere protein O. (282 aa)
	ska3	Spindle and kinetochore-associated protein 3 isoform X1. (609 aa)
	nsl1	Kinetochore-associated protein NSL1 homolog. (258 aa)
	LOC108259054	Centromere protein Q-like. (226 aa)
	anapc16	Anaphase-promoting complex subunit 16. (84 aa)
	mtbp	Mdm2-binding protein isoform X1. (857 aa)
	LOC108275580	Baculoviral IAP repeat-containing protein 5.1-like isoform X2. (146 aa)
	LOC108269026	Cytoskeleton-associated protein 5-like isoform X3. (1882 aa)
	fam43a	Protein FAM43A. (346 aa)
	cenph	Centromere protein H isoform X1. (221 aa)
	LOC108255836	Probable global transcription activator SNF2L2 isoform X1. (1593 aa)
	BIRC5	Baculoviral IAP repeat-containing protein 5-like. (190 aa)
	ska2	Spindle and kinetochore-associated protein 2. (226 aa)
	ckap5	Cytoskeleton-associated protein 5 isoform X2. (1898 aa)
	gpatch11	G patch domain-containing protein 11. (262 aa)
	bub1b	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta. (426 aa)
	ttk	Dual specificity protein kinase TTK isoform X1. (994 aa)
	LOC108262175	Pro-neuregulin-3, membrane-bound isoform-like isoform X3. (347 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BIRC5	ENSIPUP00000002468	ENSIPUP00000014983	ENSIPUP00000002468	Baculoviral IAP repeat-containing protein 5-like.	annotation not available	0.472
BIRC5	ENSIPUP00000023163	ENSIPUP00000014983	ENSIPUP00000023163	Baculoviral IAP repeat-containing protein 5-like.	annotation not available	0.777
BIRC5	LOC108257959	ENSIPUP00000014983	ENSIPUP00000033966	Baculoviral IAP repeat-containing protein 5-like.	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	0.804
BIRC5	LOC108258632	ENSIPUP00000014983	ENSIPUP00000020082	Baculoviral IAP repeat-containing protein 5-like.	Shugoshin-like 1.	0.596
BIRC5	LOC108268529	ENSIPUP00000014983	ENSIPUP00000033535	Baculoviral IAP repeat-containing protein 5-like.	Centromere protein F-like.	0.741
BIRC5	bub1	ENSIPUP00000014983	ENSIPUP00000023137	Baculoviral IAP repeat-containing protein 5-like.	Mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1.	0.777
BIRC5	bub1b	ENSIPUP00000014983	ENSIPUP00000029502	Baculoviral IAP repeat-containing protein 5-like.	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	0.804
BIRC5	cdt1	ENSIPUP00000014983	ENSIPUP00000035167	Baculoviral IAP repeat-containing protein 5-like.	DNA replication factor Cdt1.	0.450
BIRC5	cenpi	ENSIPUP00000014983	ENSIPUP00000026107	Baculoviral IAP repeat-containing protein 5-like.	Centromere protein I.	0.495
BIRC5	cenpn	ENSIPUP00000014983	ENSIPUP00000009195	Baculoviral IAP repeat-containing protein 5-like.	Centromere protein N isoform X1.	0.713
BIRC5	cenpw	ENSIPUP00000014983	ENSIPUP00000025965	Baculoviral IAP repeat-containing protein 5-like.	Centromere protein W.	0.588
BIRC5	ndc80	ENSIPUP00000014983	ENSIPUP00000010869	Baculoviral IAP repeat-containing protein 5-like.	Kinetochore protein NDC80 homolog.	0.757
BIRC5	nek2	ENSIPUP00000014983	ENSIPUP00000032633	Baculoviral IAP repeat-containing protein 5-like.	Serine/threonine-protein kinase Nek2.	0.800
BIRC5	nuf2	ENSIPUP00000014983	ENSIPUP00000016633	Baculoviral IAP repeat-containing protein 5-like.	Kinetochore protein Nuf2 isoform X2.	0.788
BIRC5	ska1	ENSIPUP00000014983	ENSIPUP00000033950	Baculoviral IAP repeat-containing protein 5-like.	Spindle and kinetochore-associated protein 1.	0.472
BIRC5	spc24	ENSIPUP00000014983	ENSIPUP00000006763	Baculoviral IAP repeat-containing protein 5-like.	Kinetochore protein Spc24 isoform X1.	0.746
BIRC5	ttk	ENSIPUP00000014983	ENSIPUP00000030259	Baculoviral IAP repeat-containing protein 5-like.	Dual specificity protein kinase TTK isoform X1.	0.780
ENSIPUP00000002468	BIRC5	ENSIPUP00000002468	ENSIPUP00000014983	annotation not available	Baculoviral IAP repeat-containing protein 5-like.	0.472
ENSIPUP00000002468	ENSIPUP00000023163	ENSIPUP00000002468	ENSIPUP00000023163	annotation not available	annotation not available	0.669
ENSIPUP00000002468	LOC108257959	ENSIPUP00000002468	ENSIPUP00000033966	annotation not available	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	0.676