24 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108267975	Shootin-1-like. (576 aa)
	LOC108272327	Uncharacterized protein LOC108272327 isoform X1. (820 aa)
	flrt3	Leucine-rich repeat Transmembrane protein FLRT3. (676 aa)
	dcc	Netrin receptor DCC isoform X2. (1435 aa)
	LOC108272349	Unconventional myosin-X-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2058 aa)
	ENSIPUP00000001839	annotation not available (67 aa)
	LOC108268502	Shootin-1-like isoform X2. (359 aa)
	ENSIPUP00000002265	annotation not available (211 aa)
	ENSIPUP00000002269	annotation not available (94 aa)
	LOC108266321	LOW QUALITY PROTEIN: unconventional myosin-X-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1948 aa)
	gpm6a	Neuronal membrane glycoprotein M6-a isoform X1. (277 aa)
	ENSIPUP00000024440	annotation not available (173 aa)
	LOC108275777	Neural cell adhesion molecule L1.1-like isoform X1. (1290 aa)
	LOC108271025	Neogenin-like isoform X6. (1422 aa)
	myo10	Unconventional myosin-X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2043 aa)
	shtn1	Shootin-1. (540 aa)
	LOC108275206	Neogenin-like isoform X3. (1422 aa)
	snph	Syntaphilin isoform X2. (662 aa)
	l1cam	Neural cell adhesion molecule L1 isoform X1. (1280 aa)
	ENSIPUP00000024516	annotation not available (497 aa)
	LOC108274369	Unconventional myosin-XVB-like isoform X2. (1456 aa)
	LOC108265973	Syntaphilin-like isoform X1. (554 aa)
	LOC108269404	Neuronal membrane glycoprotein M6-a-like. (278 aa)
	c9orf72	Protein C9orf72 homolog. (462 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSIPUP00000001839	LOC108275777	ENSIPUP00000001839	ENSIPUP00000021386	annotation not available	Neural cell adhesion molecule L1.1-like isoform X1.	0.491
ENSIPUP00000001839	l1cam	ENSIPUP00000001839	ENSIPUP00000014129	annotation not available	Neural cell adhesion molecule L1 isoform X1.	0.491
ENSIPUP00000002265	ENSIPUP00000024516	ENSIPUP00000002265	ENSIPUP00000024516	annotation not available	annotation not available	0.608
ENSIPUP00000002265	LOC108271025	ENSIPUP00000002265	ENSIPUP00000020650	annotation not available	Neogenin-like isoform X6.	0.408
ENSIPUP00000002265	LOC108275206	ENSIPUP00000002265	ENSIPUP00000016238	annotation not available	Neogenin-like isoform X3.	0.408
ENSIPUP00000002265	dcc	ENSIPUP00000002265	ENSIPUP00000027689	annotation not available	Netrin receptor DCC isoform X2.	0.408
ENSIPUP00000002269	LOC108271025	ENSIPUP00000002269	ENSIPUP00000020650	annotation not available	Neogenin-like isoform X6.	0.408
ENSIPUP00000002269	LOC108275206	ENSIPUP00000002269	ENSIPUP00000016238	annotation not available	Neogenin-like isoform X3.	0.408
ENSIPUP00000002269	dcc	ENSIPUP00000002269	ENSIPUP00000027689	annotation not available	Netrin receptor DCC isoform X2.	0.408
ENSIPUP00000024440	ENSIPUP00000024516	ENSIPUP00000024440	ENSIPUP00000024516	annotation not available	annotation not available	0.704
ENSIPUP00000024440	LOC108271025	ENSIPUP00000024440	ENSIPUP00000020650	annotation not available	Neogenin-like isoform X6.	0.408
ENSIPUP00000024440	LOC108275206	ENSIPUP00000024440	ENSIPUP00000016238	annotation not available	Neogenin-like isoform X3.	0.408
ENSIPUP00000024440	dcc	ENSIPUP00000024440	ENSIPUP00000027689	annotation not available	Netrin receptor DCC isoform X2.	0.408
ENSIPUP00000024516	ENSIPUP00000002265	ENSIPUP00000024516	ENSIPUP00000002265	annotation not available	annotation not available	0.608
ENSIPUP00000024516	ENSIPUP00000024440	ENSIPUP00000024516	ENSIPUP00000024440	annotation not available	annotation not available	0.704
ENSIPUP00000024516	LOC108271025	ENSIPUP00000024516	ENSIPUP00000020650	annotation not available	Neogenin-like isoform X6.	0.408
ENSIPUP00000024516	LOC108274369	ENSIPUP00000024516	ENSIPUP00000013815	annotation not available	Unconventional myosin-XVB-like isoform X2.	0.649
ENSIPUP00000024516	LOC108275206	ENSIPUP00000024516	ENSIPUP00000016238	annotation not available	Neogenin-like isoform X3.	0.408
ENSIPUP00000024516	dcc	ENSIPUP00000024516	ENSIPUP00000027689	annotation not available	Netrin receptor DCC isoform X2.	0.408
LOC108266321	LOC108271025	ENSIPUP00000003773	ENSIPUP00000020650	LOW QUALITY PROTEIN: unconventional myosin-X-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Neogenin-like isoform X6.	0.408