STRINGSTRING
prph2 prph2 LOC108262942 LOC108262942 rom1 rom1 LOC108269665 LOC108269665 LOC108258119 LOC108258119 LOC108259789 LOC108259789
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
prph2Peripherin-2. (345 aa)
LOC108262942Peripherin-2-like. (339 aa)
rom1Rod outer segment membrane protein 1. (355 aa)
LOC108269665Photoreceptor outer segment membrane glycoprotein 2-like. (363 aa)
LOC108258119Photoreceptor outer segment membrane glycoprotein 2-like. (355 aa)
LOC108259789RDS/peripherin-like protein xRDS35. (354 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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