STRINGSTRING
pcolce2 pcolce2 LOC108272525 LOC108272525 timp3 timp3 LOC108274409 LOC108274409 LOC108274012 LOC108274012 ntn1 ntn1 wfikkn2 wfikkn2 LOC108268019 LOC108268019 LOC108277022 LOC108277022 timp4 timp4 LOC108259386 LOC108259386 LOC108259385 LOC108259385 LOC108258755 LOC108258755 LOC108277767 LOC108277767 C17orf58 C17orf58 LOC108274651 LOC108274651 LOC108274067 LOC108274067 c5 c5 LOC108267835 LOC108267835 ntn4 ntn4 LOC108277346 LOC108277346 sfrp1 sfrp1 LOC108254932 LOC108254932 adamtsl5 adamtsl5 LOC108276893 LOC108276893 LOC108272785 LOC108272785 LOC108267218 LOC108267218 sfrp5 sfrp5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pcolce2Procollagen C-endopeptidase enhancer 2. (583 aa)
LOC108272525Netrin-1-like. (650 aa)
timp3Metalloproteinase inhibitor 3. (212 aa)
LOC108274409Netrin-3-like. (575 aa)
LOC108274012WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2-like. (575 aa)
ntn1Netrin-1. (603 aa)
wfikkn2WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2 isoform X1. (569 aa)
LOC108268019Procollagen C-endopeptidase enhancer 2-like isoform X2. (416 aa)
LOC108277022Metalloproteinase inhibitor 2-like. (219 aa)
timp4Metalloproteinase inhibitor 4. (229 aa)
LOC108259386Complement C3-like isoform X1. (1422 aa)
LOC108259385Complement C3-like isoform X1. (1662 aa)
LOC108258755WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein-like isoform X1. (568 aa)
LOC108277767Complement C4-A-like. (1670 aa)
C17orf58UPF0450 protein C17orf58 homolog. (96 aa)
LOC108274651Secreted frizzled-related protein 5-like. (284 aa)
LOC108274067Metalloproteinase inhibitor 2-like. (219 aa)
c5Complement C5. (1631 aa)
LOC108267835Netrin-1-like. (876 aa)
ntn4Netrin-4. (598 aa)
LOC108277346Procollagen C-endopeptidase enhancer 2-like. (475 aa)
sfrp1Secreted frizzled-related protein 1. (309 aa)
LOC108254932Netrin-4-like isoform X5. (623 aa)
adamtsl5ADAMTS-like protein 5. (537 aa)
LOC108276893Secreted frizzled-related protein 1-like isoform X1. (322 aa)
LOC108272785Procollagen C-endopeptidase enhancer 2-like isoform X2. (467 aa)
LOC108267218Complement C4-like. (1635 aa)
sfrp5Secreted frizzled-related protein 5. (312 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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