STRINGSTRING
chmp3 chmp3 chm4c chm4c LOC108277388 LOC108277388 chmp5 chmp5 LOC108272732 LOC108272732 chmp6 chmp6 chmp1a chmp1a chmp7 chmp7 LOC108265407 LOC108265407 chmp5-2 chmp5-2 chmp2a chmp2a chmp2b chmp2b chm2b chm2b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
chmp3Charged multivesicular body protein 3. (219 aa)
chm4cCharged multivesicular body protein 4C. (236 aa)
LOC108277388Charged multivesicular body protein 6-like isoform X2. (204 aa)
chmp5Charged multivesicular body protein 5 isoform X1. (219 aa)
LOC108272732Charged multivesicular body protein 4b. (222 aa)
chmp6Charged multivesicular body protein 6. (204 aa)
chmp1aCharged multivesicular body protein 1A. (198 aa)
chmp7Charged multivesicular body protein 7. (443 aa)
LOC108265407Charged multivesicular body protein 4b. (221 aa)
chmp5-2Charged multivesicular body protein 5. (220 aa)
chmp2aCharged multivesicular body protein 2A. (222 aa)
chmp2bCharged multivesicular body protein 2b. (214 aa)
chm2bCharged multivesicular body protein 2B. (216 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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