STRINGSTRING
cnppd1 cnppd1 LOC108275632 LOC108275632 rb1 rb1 CCNE2 CCNE2 LOC108266529 LOC108266529 ccnk ccnk rbl1 rbl1 cables2 cables2 LOC108280826 LOC108280826 ccna1 ccna1 cables1 cables1 ccng1 ccng1 ccnd2 ccnd2 ccnf ccnf LOC108278678 LOC108278678 LOC108272557 LOC108272557 ccnh ccnh ccnt2 ccnt2 cntd1 cntd1 ccnd1 ccnd1 LOC108267566 LOC108267566 ccnl1 ccnl1 ccna2 ccna2 ccnb1 ccnb1 ccnd3 ccnd3 ccnc ccnc LOC108272361 LOC108272361 LOC108279704 LOC108279704 LOC108258148 LOC108258148 cdk5r1 cdk5r1 ccnj ccnj ccnq ccnq CCNO CCNO LOC108275335 LOC108275335 LOC108276423 LOC108276423 ccnt1 ccnt1 ccng2 ccng2 ccni ccni LOC108267136 LOC108267136 rbl2 rbl2 ccnb2 ccnb2 brf1 brf1 ccnyl1 ccnyl1 ccnjl ccnjl brf2 brf2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cnppd1Protein CNPPD1. (400 aa)
LOC108275632Cyclin-dependent kinase 5 activator 1-like. (293 aa)
rb1Retinoblastoma-associated protein. (902 aa)
CCNE2G1/S-specific cyclin-E2-like; Belongs to the cyclin family. (379 aa)
LOC108266529cyclin-T2-like isoform X5; Belongs to the cyclin family. (617 aa)
ccnkcyclin-K; Belongs to the cyclin family. (490 aa)
rbl1Retinoblastoma-like protein 1. (1048 aa)
cables2CDK5 and ABL1 enzyme substrate 2; Belongs to the cyclin family. (480 aa)
LOC108280826G1/S-specific cyclin-D1-like isoform X1; Belongs to the cyclin family. (296 aa)
ccna1cyclin-A1 isoform X2; Belongs to the cyclin family. (397 aa)
cables1CDK5 and ABL1 enzyme substrate 1 isoform X1. (523 aa)
ccng1Cyclin-G1; Belongs to the cyclin family. (299 aa)
ccnd2G1/S-specific cyclin-D2; Belongs to the cyclin family. (298 aa)
ccnfCyclin-F; Belongs to the cyclin family. (772 aa)
LOC108278678G2/mitotic-specific cyclin-B3-like; Belongs to the cyclin family. (414 aa)
LOC108272557Cyclin-dependent kinase 5 activator. (310 aa)
ccnhCyclin-H; Belongs to the cyclin family. (321 aa)
ccnt2cyclin-T2; Belongs to the cyclin family. (558 aa)
cntd1Cyclin N-terminal domain-containing protein 1 isoform X1. (320 aa)
ccnd1G1/S-specific cyclin-D1; Belongs to the cyclin family. (292 aa)
LOC108267566cyclin-L1-like. (143 aa)
ccnl1cyclin-L1 isoform X1; Belongs to the cyclin family. (529 aa)
ccna2cyclin-A2; Belongs to the cyclin family. (423 aa)
ccnb1G2/mitotic-specific cyclin-B1 isoform X2; Belongs to the cyclin family. (401 aa)
ccnd3G1/S-specific cyclin-D3 isoform X1; Belongs to the cyclin family. (278 aa)
ccnccyclin-C isoform X1; Belongs to the cyclin family. (283 aa)
LOC108272361Cyclin-dependent kinase 5 activator. (320 aa)
LOC108279704G1/S-specific cyclin-D2-like; Belongs to the cyclin family. (298 aa)
LOC108258148Transcription factor IIIB 90 kDa subunit-like. (693 aa)
cdk5r1Cyclin-dependent kinase 5 activator. (321 aa)
ccnjcyclin-J; Belongs to the cyclin family. (366 aa)
ccnqCyclin-related protein FAM58A isoform X1; Belongs to the cyclin family. (248 aa)
CCNOcyclin-O; Belongs to the cyclin family. (306 aa)
LOC108275335G1/S-specific cyclin-E2-like; Belongs to the cyclin family. (392 aa)
LOC108276423CDK5 and ABL1 enzyme substrate 2-like isoform X1. (497 aa)
ccnt1cyclin-T1 isoform X2; Belongs to the cyclin family. (495 aa)
ccng2Cyclin-G2; Belongs to the cyclin family. (323 aa)
ccnicyclin-I isoform X1; Belongs to the cyclin family. (346 aa)
LOC108267136G2/mitotic-specific cyclin-B3-like isoform X1; Belongs to the cyclin family. (432 aa)
rbl2Retinoblastoma-like protein 2 isoform X3. (1079 aa)
ccnb2G2/mitotic-specific cyclin-B2 isoform X1; Belongs to the cyclin family. (398 aa)
brf1Transcription factor IIIB 90 kDa subunit. (650 aa)
ccnyl1cyclin-Y-like protein 1 isoform X2; Belongs to the cyclin family. (339 aa)
ccnjlcyclin-J-like protein; Belongs to the cyclin family. (405 aa)
brf2Transcription factor IIIB 50 kDa subunit. (401 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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