STRINGSTRING
LOC108277808 LOC108277808 ENSIPUP00000024791 ENSIPUP00000024791 ccna2 ccna2 LOC108278223 LOC108278223 ccne1 ccne1 cdk2 cdk2 e2f4 e2f4 LOC108261791 LOC108261791 tfdp1 tfdp1 LOC108261863 LOC108261863 ccna1 ccna1 LOC108256247 LOC108256247 dyrk1a dyrk1a mybl2 mybl2 rbl1 rbl1 LOC108268108 LOC108268108 CCNE2 CCNE2 lin37 lin37 lin52 lin52 LOC108275335 LOC108275335 rbl2 rbl2 LOC108266453 LOC108266453 ENSIPUP00000037178 ENSIPUP00000037178 lin9 lin9 lin54 lin54
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108277808Transcription factor. (445 aa)
ENSIPUP00000024791annotation not available (893 aa)
ccna2cyclin-A2; Belongs to the cyclin family. (423 aa)
LOC108278223Dual specificity tyrosine-phosphorylation-regulated kinase 1A-like. (749 aa)
ccne1G1/S-specific cyclin-E1 isoform X2; Belongs to the cyclin family. (404 aa)
cdk2Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (301 aa)
e2f4Transcription factor E2F4. (390 aa)
LOC108261791Transcription factor E2F5-like. (135 aa)
tfdp1Transcription factor. (389 aa)
LOC108261863Transcription factor E2F5-like. (127 aa)
ccna1cyclin-A1 isoform X2; Belongs to the cyclin family. (397 aa)
LOC108256247Dual specificity tyrosine-phosphorylation-regulated kinase 1B-like isoform X2. (723 aa)
dyrk1aDual specificity tyrosine phosphorylation regulated kinase 1A. (616 aa)
mybl2Myb-related protein B. (643 aa)
rbl1Retinoblastoma-like protein 1. (1048 aa)
LOC108268108Transcription factor E2F5-like. (374 aa)
CCNE2G1/S-specific cyclin-E2-like; Belongs to the cyclin family. (379 aa)
lin37Protein lin-37 homolog isoform X1. (239 aa)
lin52Protein lin-52 homolog. (111 aa)
LOC108275335G1/S-specific cyclin-E2-like; Belongs to the cyclin family. (392 aa)
rbl2Retinoblastoma-like protein 2 isoform X3. (1079 aa)
LOC108266453Transcription factor. (407 aa)
ENSIPUP00000037178annotation not available (306 aa)
lin9Protein lin-9 homolog isoform X1. (543 aa)
lin54Protein lin-54 homolog isoform X1. (805 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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