STRINGSTRING
ccna2 ccna2 trub1 trub1 pot1 pot1 pif1 pif1 ankrd44 ankrd44 rtel1 rtel1 cdk2 cdk2 terf2 terf2 ppp6c ppp6c ankrd52 ankrd52 dkc1 dkc1 ruvbl2 ruvbl2 nop10 nop10 ccna1 ccna1 terf1 terf1 terf2ip terf2ip LOC108267930 LOC108267930 LOC108256911 LOC108256911 nhp2 nhp2 gar1 gar1 ANKRD52 ANKRD52 ankrd28 ankrd28 shq1 shq1 wrap53 wrap53 LOC108259650 LOC108259650 tert tert LOC108275203 LOC108275203
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccna2cyclin-A2; Belongs to the cyclin family. (423 aa)
trub1Probable tRNA pseudouridine synthase 1. (302 aa)
pot1Protection of telomeres protein 1 isoform X1. (778 aa)
pif1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (654 aa)
ankrd44Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B. (978 aa)
rtel1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1175 aa)
cdk2Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (301 aa)
terf2Telomeric repeat-binding factor 2 isoform X1. (649 aa)
ppp6cSerine/threonine-protein phosphatase. (223 aa)
ankrd52Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X2. (1067 aa)
dkc1H/ACA ribonucleoprotein complex subunit 4 isoform X1. (596 aa)
ruvbl2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (463 aa)
nop10H/ACA ribonucleoprotein complex subunit 3. (64 aa)
ccna1cyclin-A1 isoform X2; Belongs to the cyclin family. (397 aa)
terf1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (404 aa)
terf2ipTelomeric repeat-binding factor 2-interacting protein 1 isoform X1. (536 aa)
LOC108267930Uncharacterized protein LOC108267930 isoform X1. (604 aa)
LOC108256911Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like isoform X1. (1093 aa)
nhp2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (151 aa)
gar1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (211 aa)
ANKRD52Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like. (1053 aa)
ankrd28Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A. (1053 aa)
shq1Protein SHQ1 homolog. (576 aa)
wrap53Telomerase Cajal body protein 1. (541 aa)
LOC108259650RNA-binding protein with multiple splicing. (200 aa)
tertTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1097 aa)
LOC108275203RNA-binding protein with multiple splicing isoform X2. (212 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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