STRINGSTRING
LOC108277883 LOC108277883 ikbkb ikbkb LOC108271130 LOC108271130 ngfr ngfr prdm4 prdm4 fgd3 fgd3 LOC108257789 LOC108257789 LOC108270063 LOC108270063 ngf ngf LOC108260059 LOC108260059 aatf aatf LOC108268868 LOC108268868 arhgef6 arhgef6 traf6 traf6 LOC108276555 LOC108276555 arhgef15 arhgef15 arhgef16 arhgef16 trio trio arhgef19 arhgef19 LOC108276970 LOC108276970 LOC108272447 LOC108272447 LOC108259198 LOC108259198 ENSIPUP00000031366 ENSIPUP00000031366 kalrn kalrn bad bad arhgef7 arhgef7 mcf2l mcf2l LOC108275881 LOC108275881 itsn1 itsn1 arhgef1 arhgef1 rasgrf2 rasgrf2 ncstn ncstn bcl2l11 bcl2l11 net1 net1 gsap gsap LOC108276802 LOC108276802 LOC108257846 LOC108257846 LOC108273578 LOC108273578 arhgef39 arhgef39 LOC108272055 LOC108272055 arhgef10 arhgef10 ngef ngef ect2l ect2l rps27a rps27a arhgef33 arhgef33 LOC108258222 LOC108258222 LOC108268008 LOC108268008 fgd4 fgd4 LOC108276039 LOC108276039 lingo1 lingo1 LOC108276493 LOC108276493 LOC108276977 LOC108276977 prkci prkci irak1 irak1 sqstm1 sqstm1 LOC108266043 LOC108266043 nfkbia nfkbia vav2 vav2 myd88 myd88 sos1 sos1 LOC108277910 LOC108277910 tiam1 tiam1 vav1 vav1 tiam2 tiam2 arhgef26 arhgef26 arhgef11 arhgef11 arhgef2 arhgef2 arhgdia arhgdia ripk2 ripk2 LOC108260926 LOC108260926 LOC108269999 LOC108269999 ENSIPUP00000012824 ENSIPUP00000012824 LOC108268405 LOC108268405 casp2 casp2 arhgef25 arhgef25 arhgef3 arhgef3 PLEKHG4B PLEKHG4B plekhg2 plekhg2 LOC108274662 LOC108274662 LOC108258586 LOC108258586 ENSIPUP00000009849 ENSIPUP00000009849 LOC108257866 LOC108257866 obsl1 obsl1 LOC108281061 LOC108281061 sestd1 sestd1 kxd1 kxd1 LOC108271158 LOC108271158 arhgef17 arhgef17 uba52 uba52 LOC108271374 LOC108271374 LOC108266998 LOC108266998 LOC108280391 LOC108280391 prex1 prex1 LOC108277818 LOC108277818 LOC108273756 LOC108273756 sos2 sos2 LOC108268400 LOC108268400 vav3 vav3 ect2 ect2 rtn1 rtn1 rtn1-2 rtn1-2 LOC108270998 LOC108270998 LOC108278361 LOC108278361 arhgef38 arhgef38 kiaa1755 kiaa1755 arhgef37 arhgef37 LOC100304952 LOC100304952 LOC108278714 LOC108278714 psenen psenen ENSIPUP00000001061 ENSIPUP00000001061 LOC108266232 LOC108266232 LOC108273768 LOC108273768 LOC108262827 LOC108262827 ENSIPUP00000000911 ENSIPUP00000000911
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108277883Myelin-associated glycoprotein-like isoform X1. (645 aa)
ikbkbInhibitor of nuclear factor kappa-B kinase subunit beta isoform X1. (776 aa)
LOC108271130Disintegrin and metalloproteinase domain-containing protein 10-like isoform X1. (688 aa)
ngfrTumor necrosis factor receptor superfamily member 16 isoform X1. (378 aa)
prdm4PR domain zinc finger protein 4 isoform X1. (836 aa)
fgd3FYVE, RhoGEF and PH domain-containing protein 3 isoform X1. (912 aa)
LOC108257789Disintegrin and metalloproteinase domain-containing protein 17-like. (833 aa)
LOC108270063Disintegrin and metalloproteinase domain-containing protein 17-like isoform X1. (838 aa)
ngfBeta-nerve growth factor; Belongs to the NGF-beta family. (197 aa)
LOC108260059Rho guanine nucleotide exchange factor 12-like isoform X2. (1324 aa)
aatfProtein AATF isoform X1. (550 aa)
LOC108268868Proto-oncogene DBL-like. (1106 aa)
arhgef6Rho guanine nucleotide exchange factor 6 isoform X1. (777 aa)
traf6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (540 aa)
LOC108276555Leucine-rich repeat transmembrane neuronal protein 4-like. (634 aa)
arhgef15Rho guanine nucleotide exchange factor 15 isoform X3. (901 aa)
arhgef16Rho guanine nucleotide exchange factor 16. (667 aa)
trioTriple functional domain protein isoform X5. (3039 aa)
arhgef19Rho guanine nucleotide exchange factor 19. (966 aa)
LOC108276970Oligodendrocyte-myelin glycoprotein-like. (229 aa)
LOC108272447Kalirin-like. (1567 aa)
LOC108259198Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B. (622 aa)
ENSIPUP00000031366Kalirin-like. (624 aa)
kalrnKalirin isoform X2. (2858 aa)
badBcl2-associated agonist of cell death. (198 aa)
arhgef7Rho guanine nucleotide exchange factor 7 isoform X1. (788 aa)
mcf2lGuanine nucleotide exchange factor DBS isoform X5. (1154 aa)
LOC108275881Rho guanine nucleotide exchange factor 10-like protein isoform X3. (1310 aa)
itsn1Intersectin-1 isoform X2. (1526 aa)
arhgef1Rho guanine nucleotide exchange factor 1 isoform X4. (1005 aa)
rasgrf2Ras-specific guanine nucleotide-releasing factor 2 isoform X1. (1270 aa)
ncstnNicastrin. (721 aa)
bcl2l11Bcl-2-like protein 11 isoform X2. (221 aa)
net1Neuroepithelial cell-transforming gene 1 protein isoform X1. (592 aa)
gsapGamma-secretase-activating protein. (877 aa)
LOC108276802Proto-oncogene DBL-like isoform X2. (797 aa)
LOC108257846Reticulon. (767 aa)
LOC108273578Tumor necrosis factor receptor superfamily member 16-like. (409 aa)
arhgef39Rho guanine nucleotide exchange factor 39 isoform X3. (427 aa)
LOC108272055Rho guanine nucleotide exchange factor 19-like. (537 aa)
arhgef10Rho guanine nucleotide exchange factor 10 isoform X1. (1345 aa)
ngefEphexin-1. (739 aa)
ect2lEpithelial cell-transforming sequence 2 oncogene-like isoform X4. (918 aa)
rps27aUbiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...] (156 aa)
arhgef33Rho guanine nucleotide exchange factor 33 isoform X1. (702 aa)
LOC108258222NF-kappa-B inhibitor alpha-like. (308 aa)
LOC108268008Rho guanine nucleotide exchange factor 18-like. (924 aa)
fgd4FYVE, RhoGEF and PH domain-containing protein 4 isoform X1. (848 aa)
LOC108276039Rho guanine nucleotide exchange factor 3-like. (529 aa)
lingo1Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1. (615 aa)
LOC108276493Neurotrophin-7-like; Belongs to the NGF-beta family. (211 aa)
LOC108276977Ras-specific guanine nucleotide-releasing factor 2-like isoform X3. (1084 aa)
prkciProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (509 aa)
irak1Interleukin-1 receptor-associated kinase 1 isoform X4. (718 aa)
sqstm1Sequestosome-1. (460 aa)
LOC108266043FYVE, RhoGEF and PH domain-containing protein 1-like isoform X1. (996 aa)
nfkbiaNF-kappa-B inhibitor alpha. (320 aa)
vav2Guanine nucleotide exchange factor VAV2 isoform X1. (867 aa)
myd88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (279 aa)
sos1Son of sevenless homolog 1. (1313 aa)
LOC108277910Rho guanine nucleotide exchange factor 12-like isoform X1. (252 aa)
tiam1T-lymphoma invasion and metastasis-inducing protein 1. (1615 aa)
vav1Proto-oncogene vav. (846 aa)
tiam2T-lymphoma invasion and metastasis-inducing protein 2 isoform X3. (1561 aa)
arhgef26Rho guanine nucleotide exchange factor 26. (914 aa)
arhgef11Rho guanine nucleotide exchange factor 11 isoform X3. (1419 aa)
arhgef2Rho guanine nucleotide exchange factor 2 isoform X1. (1148 aa)
arhgdiaRho GDP-dissociation inhibitor 1. (203 aa)
ripk2Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. (579 aa)
LOC108260926Rho guanine nucleotide exchange factor 40-like. (742 aa)
LOC108269999Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (462 aa)
ENSIPUP00000012824annotation not available (111 aa)
LOC108268405Trichohyalin-like. (1599 aa)
casp2LOW QUALITY PROTEIN: caspase-2; Belongs to the peptidase C14A family. (439 aa)
arhgef25Rho guanine nucleotide exchange factor 25 isoform X2. (733 aa)
arhgef3Rho guanine nucleotide exchange factor 3 isoform X1. (526 aa)
PLEKHG4BPleckstrin homology domain-containing family G member 4B-like isoform X1. (1730 aa)
plekhg2Pleckstrin homology domain-containing family G member 2 isoform X1. (2100 aa)
LOC108274662Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1. (627 aa)
LOC108258586Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (434 aa)
ENSIPUP00000009849Si:dkey-148h10.5. (122 aa)
LOC108257866T-lymphoma invasion and metastasis-inducing protein 2-like isoform X1. (455 aa)
obsl1Obscurin-like protein 1 isoform X5. (3088 aa)
LOC108281061Rho guanine nucleotide exchange factor 10-like protein. (1005 aa)
sestd1SEC14 domain and spectrin repeat-containing protein 1 isoform X1. (717 aa)
kxd1kxDL motif-containing protein 1 isoform X2. (187 aa)
LOC108271158Receptor-interacting serine/threonine-protein kinase 2-like isoform X1. (531 aa)
arhgef17Rho guanine nucleotide exchange factor 17 isoform X1. (2393 aa)
uba52ubiquitin-60S ribosomal protein L40 isoform X1. (128 aa)
LOC108271374Gamma-secretase subunit Aph-1b. (258 aa)
LOC108266998Rho guanine nucleotide exchange factor 7-like isoform X1. (802 aa)
LOC108280391Rho guanine nucleotide exchange factor 2-like isoform X1. (1170 aa)
prex1Phosphatidylinositol 3,4,5-trisphosphate-dependent raC exchanger 1 protein. (1616 aa)
LOC108277818Oligodendrocyte-myelin glycoprotein-like. (340 aa)
LOC108273756Rho guanine nucleotide exchange factor 15-like isoform X3. (940 aa)
sos2Son of sevenless homolog 2. (1258 aa)
LOC108268400Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2. (614 aa)
vav3Guanine nucleotide exchange factor VAV3. (842 aa)
ect2Protein ECT2 isoform X7. (974 aa)
rtn1Reticulon. (204 aa)
rtn1-2Reticulon. (314 aa)
LOC108270998Guanine nucleotide exchange factor DBS-like isoform X7. (1147 aa)
LOC108278361T-lymphoma invasion and metastasis-inducing protein 1-like isoform X1. (1458 aa)
arhgef38Rho guanine nucleotide exchange factor 38. (680 aa)
kiaa1755Uncharacterized protein KIAA1755 homolog isoform X1. (1798 aa)
arhgef37Rho guanine nucleotide exchange factor 37 isoform X1. (726 aa)
LOC100304952Gamma-secretase subunit Aph-1b. (260 aa)
LOC108278714Guanine nucleotide-binding protein subunit alpha-13. (381 aa)
psenenPresenilin enhancer, gamma-secretase subunit. (66 aa)
ENSIPUP00000001061Guanine nucleotide exchange factor DBS-like. (143 aa)
LOC108266232Guanine nucleotide exchange factor DBS-like isoform X1. (823 aa)
LOC108273768Guanine nucleotide-binding protein subunit alpha-13-like. (376 aa)
LOC108262827Triple functional domain protein-like. (2236 aa)
ENSIPUP00000000911annotation not available (359 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.