STRINGSTRING
meiob meiob rfc1 rfc1 rev1 rev1 rpa1 rpa1 uba52 uba52 kxd1 kxd1 mad2l2 mad2l2 rfc3 rfc3 LOC108272412 LOC108272412 rfc4 rfc4 polk polk rpa2 rpa2 rps27a rps27a atad5 atad5 rev3l rev3l ENSIPUP00000024302 ENSIPUP00000024302 rpa3 rpa3 rfc5 rfc5 rcbtb1 rcbtb1 rcbtb2 rcbtb2 LOC108273255 LOC108273255 pcna pcna rfc2 rfc2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
meiobMeiosis-specific with OB domain-containing protein. (466 aa)
rfc1Replication factor C subunit 1. (1129 aa)
rev1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1238 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (606 aa)
uba52ubiquitin-60S ribosomal protein L40 isoform X1. (128 aa)
kxd1kxDL motif-containing protein 1 isoform X2. (187 aa)
mad2l2Mitotic Spindle assembly checkpoint protein MAD2B. (215 aa)
rfc3Replication factor C subunit 3. (356 aa)
LOC108272412Replication protein A 32 kDa subunit-like. (251 aa)
rfc4Replication factor C subunit 4 isoform X1. (358 aa)
polkDNA polymerase kappa. (927 aa)
rpa2Replication protein A 32 kDa subunit. (294 aa)
rps27aUbiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...] (156 aa)
atad5ATPase family AAA domain-containing protein 5 isoform X1. (1798 aa)
rev3lDNA polymerase zeta catalytic subunit. (292 aa)
ENSIPUP00000024302annotation not available (542 aa)
rpa3Replication protein A 14 kDa subunit. (122 aa)
rfc5Replication factor C subunit 5. (339 aa)
rcbtb1RCC1 and BTB domain-containing protein 1. (531 aa)
rcbtb2RCC1 and BTB domain-containing protein 2. (540 aa)
LOC108273255ATPase family AAA domain-containing protein 5-like. (927 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (297 aa)
rfc2Replication factor C subunit 2. (357 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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