STRINGSTRING
ube2v2 ube2v2 ube2i ube2i usp45 usp45 ercc4 ercc4 nfatc2ip nfatc2ip meiob meiob ENSIPUP00000003801 ENSIPUP00000003801 mnat1 mnat1 rad23b rad23b rpa1 rpa1 uba52 uba52 kxd1 kxd1 ddb1 ddb1 xpc xpc ercc2 ercc2 cetn1 cetn1 LOC108280745 LOC108280745 bivm bivm ercc5 ercc5 gtf2h1 gtf2h1 cul4a cul4a LOC108272412 LOC108272412 ercc1 ercc1 kctd2 kctd2 ccnh ccnh rpa2 rpa2 rps27a rps27a parp2 parp2 gtf2h4 gtf2h4 ube2n ube2n rpa3 rpa3 LOC108273059 LOC108273059 parp3 parp3 cul4b cul4b cetn3 cetn3 LOC108257257 LOC108257257 LOC108259600 LOC108259600 cdk7 cdk7 gtf2h5 gtf2h5 parp1 parp1 gtf2h3 gtf2h3 sumo1 sumo1 ercc3 ercc3 LOC108279000 LOC108279000 sumo2 sumo2 chd1l chd1l rbx1 rbx1 gtf2h2c gtf2h2c sumo2-2 sumo2-2 LOC108264782 LOC108264782 rnf111 rnf111 LOC108271249 LOC108271249
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ube2v2Ubiquitin-conjugating enzyme E2 variant 2. (148 aa)
ube2iSUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family. (177 aa)
usp45Ubiquitin carboxyl-terminal hydrolase. (777 aa)
ercc4DNA repair endonuclease XPF. (899 aa)
nfatc2ipNFATC2-interacting protein. (283 aa)
meiobMeiosis-specific with OB domain-containing protein. (466 aa)
ENSIPUP00000003801annotation not available (96 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (310 aa)
rad23bUV excision repair protein RAD23 homolog B. (384 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (606 aa)
uba52ubiquitin-60S ribosomal protein L40 isoform X1. (128 aa)
kxd1kxDL motif-containing protein 1 isoform X2. (187 aa)
ddb1DNA damage-binding protein 1. (1140 aa)
xpcDNA repair protein complementing XP-C cells isoform X1. (896 aa)
ercc2TFIIH basal transcription factor complex helicase XPD subunit isoform X1. (761 aa)
cetn1Centrin-1. (186 aa)
LOC108280745Von Willebrand factor A domain-containing protein 5B1-like isoform X2. (1300 aa)
bivmBasic immunoglobulin-like variable motif-containing protein isoform X1. (504 aa)
ercc5DNA repair protein complementing XP-G cells. (1107 aa)
gtf2h1General transcription factor IIH subunit 1. (549 aa)
cul4acullin-4A; Belongs to the cullin family. (741 aa)
LOC108272412Replication protein A 32 kDa subunit-like. (251 aa)
ercc1DNA excision repair protein ERCC-1. (367 aa)
kctd2BTB/POZ domain-containing protein KCTD2. (266 aa)
ccnhCyclin-H; Belongs to the cyclin family. (321 aa)
rpa2Replication protein A 32 kDa subunit. (294 aa)
rps27aUbiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...] (156 aa)
parp2Poly [ADP-ribose] polymerase. (629 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (467 aa)
ube2nUbiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
rpa3Replication protein A 14 kDa subunit. (122 aa)
LOC108273059Small ubiquitin-related modifier. (94 aa)
parp3Poly [ADP-ribose] polymerase. (524 aa)
cul4bcullin-4B; Belongs to the cullin family. (854 aa)
cetn3Centrin-3 isoform X2. (208 aa)
LOC108257257SUMO-conjugating enzyme UBC9-B. (157 aa)
LOC108259600E3 SUMO-protein ligase PIAS1-like isoform X1. (641 aa)
cdk7Cell division protein kinase 7; Belongs to the protein kinase superfamily. (345 aa)
gtf2h5General transcription factor IIH subunit 5 isoform X1. (71 aa)
parp1Poly [ADP-ribose] polymerase. (1018 aa)
gtf2h3General transcription factor IIH subunit 3 isoform X1. (300 aa)
sumo1Small ubiquitin-related modifier. (131 aa)
ercc3TFIIH basal transcription factor complex helicase XPB subunit. (780 aa)
LOC108279000E3 ubiquitin-protein ligase RBX1-like. (108 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
chd1lchromodomain-helicase-DNA-binding protein 1-like. (1024 aa)
rbx1E3 ubiquitin-protein ligase RBX1. (108 aa)
gtf2h2cGeneral transcription factor IIH subunit 2-like protein. (394 aa)
sumo2-2Small ubiquitin-related modifier. (95 aa)
LOC108264782E3 SUMO-protein ligase PIAS1-like isoform X3. (674 aa)
rnf111E3 ubiquitin-protein ligase Arkadia isoform X1. (985 aa)
LOC108271249UV excision repair protein RAD23 homolog A-like isoform X1. (468 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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