STRINGSTRING
LOC108268245 LOC108268245 ENSIPUP00000017588 ENSIPUP00000017588 ENSIPUP00000017291 ENSIPUP00000017291 LOC108261847 LOC108261847 LOC108272412 LOC108272412 LOC108277091 LOC108277091 ENSIPUP00000016640 ENSIPUP00000016640 ENSIPUP00000016549 ENSIPUP00000016549 ENSIPUP00000016502 ENSIPUP00000016502 ENSIPUP00000019860 ENSIPUP00000019860 LOC108268074 LOC108268074 LOC108257597 LOC108257597 LOC108257580 LOC108257580 LOC108257800 LOC108257800 LOC108260838 LOC108260838 LOC108262218 LOC108262218 polk polk LOC108280424 LOC108280424 LOC108262125 LOC108262125 LOC108256133 LOC108256133 LOC108257623 LOC108257623 rfc4 rfc4 ENSIPUP00000016492 ENSIPUP00000016492 ENSIPUP00000016481 ENSIPUP00000016481 LOC108268231 LOC108268231 sprtn sprtn LOC108269711 LOC108269711 LOC108269709 LOC108269709 pclaf pclaf rps27a rps27a atad5 atad5 spata5l1 spata5l1 rev3l rev3l ENSIPUP00000024302 ENSIPUP00000024302 LOC108278123 LOC108278123 LOC108278117 LOC108278117 LOC108278118 LOC108278118 LOC108278125 LOC108278125 LOC108278120 LOC108278120 LOC108278132 LOC108278132 pole2 pole2 LOC108260603 LOC108260603 polh polh rpa3 rpa3 LOC108272572 LOC108272572 LOC108257673 LOC108257673 LOC108278124 LOC108278124 LOC108278128 LOC108278128 LOC108277567 LOC108277567 rad18 rad18 LOC108277775 LOC108277775 cul4b cul4b usp31 usp31 LOC108259858 LOC108259858 rfc5 rfc5 ufd1 ufd1 wdr48 wdr48 rfc2 rfc2 pcna pcna LOC108277007 LOC108277007 LOC108269710 LOC108269710 ENSIPUP00000016302 ENSIPUP00000016302 LOC108257761 LOC108257761 LOC108257762 LOC108257762 cul4a cul4a LOC108261673 LOC108261673 rfc3 rfc3 rchy1 rchy1 poli poli pold1 pold1 rbx1 rbx1 LOC108260776 LOC108260776 LOC108273255 LOC108273255 dtl dtl LOC108273772 LOC108273772 ENSIPUP00000032450 ENSIPUP00000032450 LOC108279000 LOC108279000 pole pole LOC108261094 LOC108261094 rcbtb1 rcbtb1 LOC108267740 LOC108267740 ENSIPUP00000030389 ENSIPUP00000030389 LOC108267739 LOC108267739 LOC108267241 LOC108267241 LOC108267738 LOC108267738 rcbtb2 rcbtb2 LOC108278809 LOC108278809 ENSIPUP00000014965 ENSIPUP00000014965 LOC108278027 LOC108278027 LOC108275265 LOC108275265 ENSIPUP00000014037 ENSIPUP00000014037 LOC108256816 LOC108256816 LOC108260925 LOC108260925 LOC108260924 LOC108260924 LOC108260922 LOC108260922 LOC108260923 LOC108260923 LOC108268031 LOC108268031 ENSIPUP00000012592 ENSIPUP00000012592 LOC108260233 LOC108260233 usp43 usp43 ENSIPUP00000012150 ENSIPUP00000012150 LOC108267985 LOC108267985 LOC108267982 LOC108267982 LOC108267983 LOC108267983 LOC108261393 LOC108261393 vcp vcp LOC108280683 LOC108280683 LOC108280685 LOC108280685 pole3 pole3 mad2l2 mad2l2 LOC108271213 LOC108271213 pole4 pole4 nploc4 nploc4 LOC108267123 LOC108267123 LOC108267709 LOC108267709 LOC108267929-3 LOC108267929-3 ENSIPUP00000010053 ENSIPUP00000010053 LOC108267929-2 LOC108267929-2 LOC108261256 LOC108261256 ENSIPUP00000009909 ENSIPUP00000009909 LOC108267929 LOC108267929 LOC108267939 LOC108267939 usp1 usp1 LOC108265344 LOC108265344 LOC108267931 LOC108267931 LOC108267941 LOC108267941 LOC108267938 LOC108267938 ENSIPUP00000008611 ENSIPUP00000008611 usp10 usp10 LOC108267937 LOC108267937 ENSIPUP00000008476 ENSIPUP00000008476 LOC108267936 LOC108267936 ddb1 ddb1 kxd1 kxd1 LOC108263523 LOC108263523 LOC108258556 LOC108258556 LOC108258555 LOC108258555 uba52 uba52 LOC108258552 LOC108258552 LOC108258557 LOC108258557 LOC108258561 LOC108258561 ENSIPUP00000007038 ENSIPUP00000007038 ENSIPUP00000006392 ENSIPUP00000006392 rpa1 rpa1 LOC108260320 LOC108260320 ENSIPUP00000006354 ENSIPUP00000006354 rev1 rev1 rfc1 rfc1 pold2 pold2 pold3 pold3 meiob meiob ENSIPUP00000001934 ENSIPUP00000001934 LOC108275737 LOC108275737 ENSIPUP00000000970 ENSIPUP00000000970 spata5 spata5 LOC108262433 LOC108262433 LOC108268261 LOC108268261 ENSIPUP00000020157 ENSIPUP00000020157 ENSIPUP00000020283 ENSIPUP00000020283 ENSIPUP00000020309 ENSIPUP00000020309 LOC108268233 LOC108268233 LOC108268229 LOC108268229 LOC108268240 LOC108268240 LOC108257613 LOC108257613 LOC108257788 LOC108257788 LOC108257667 LOC108257667 LOC108268241 LOC108268241 pold4 pold4 LOC108268236 LOC108268236 LOC108268232 LOC108268232 LOC108268232-2 LOC108268232-2 LOC108257886 LOC108257886 rpa2 rpa2 ENSIPUP00000021907 ENSIPUP00000021907 LOC108268234 LOC108268234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108268245E3 ubiquitin/ISG15 ligase TRIM25-like. (550 aa)
ENSIPUP00000017588E3 ubiquitin/ISG15 ligase TRIM25-like. (205 aa)
ENSIPUP00000017291annotation not available (413 aa)
LOC108261847E3 ubiquitin/ISG15 ligase TRIM25-like. (262 aa)
LOC108272412Replication protein A 32 kDa subunit-like. (251 aa)
LOC108277091E3 ubiquitin/ISG15 ligase TRIM25-like. (210 aa)
ENSIPUP00000016640annotation not available (181 aa)
ENSIPUP00000016549annotation not available (186 aa)
ENSIPUP00000016502annotation not available (562 aa)
ENSIPUP00000019860annotation not available (101 aa)
LOC108268074E3 ubiquitin/ISG15 ligase TRIM25-like. (547 aa)
LOC108257597Tripartite motif-containing protein 16-like. (571 aa)
LOC108257580Tripartite motif-containing protein 16-like. (594 aa)
LOC108257800Tripartite motif-containing protein 16-like. (383 aa)
LOC108260838Butyrophilin subfamily 1 member A1-like isoform X1. (509 aa)
LOC108262218Tripartite motif-containing protein 16-like. (284 aa)
polkDNA polymerase kappa. (927 aa)
LOC108280424Tripartite motif-containing protein 16-like isoform X1. (478 aa)
LOC108262125E3 ubiquitin/ISG15 ligase TRIM25-like. (46 aa)
LOC108256133E3 ubiquitin-protein ligase TRIM39-like isoform X1. (546 aa)
LOC108257623Tripartite motif-containing protein 16-like protein isoform X2. (557 aa)
rfc4Replication factor C subunit 4 isoform X1. (358 aa)
ENSIPUP00000016492annotation not available (77 aa)
ENSIPUP00000016481annotation not available (163 aa)
LOC108268231E3 ubiquitin-protein ligase TRIM39-like isoform X1. (531 aa)
sprtnsprT-like domain-containing protein Spartan. (744 aa)
LOC108269711E3 ubiquitin-protein ligase TRIM39-like. (547 aa)
LOC108269709E3 ubiquitin-protein ligase TRIM39-like. (596 aa)
pclafPCNA-associated factor. (115 aa)
rps27aUbiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...] (156 aa)
atad5ATPase family AAA domain-containing protein 5 isoform X1. (1798 aa)
spata5l1Spermatogenesis-associated protein 5-like protein 1. (764 aa)
rev3lDNA polymerase zeta catalytic subunit. (292 aa)
ENSIPUP00000024302annotation not available (542 aa)
LOC108278123Tripartite motif-containing protein 16-like. (550 aa)
LOC108278117Tripartite motif-containing protein 16-like. (513 aa)
LOC108278118Tripartite motif-containing protein 16-like. (558 aa)
LOC108278125Tripartite motif-containing protein 16-like. (561 aa)
LOC108278120Tripartite motif-containing protein 16-like protein. (540 aa)
LOC108278132Tripartite motif-containing protein 16-like. (529 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
LOC108260603Nuclear factor 7, brain-like isoform X2. (585 aa)
polhDNA polymerase eta. (299 aa)
rpa3Replication protein A 14 kDa subunit. (122 aa)
LOC108272572E3 ubiquitin/ISG15 ligase TRIM25-like. (399 aa)
LOC108257673E3 ubiquitin/ISG15 ligase TRIM25-like. (494 aa)
LOC108278124E3 ubiquitin/ISG15 ligase TRIM25-like. (555 aa)
LOC108278128Tripartite motif-containing protein 16-like isoform X1. (545 aa)
LOC108277567E3 ubiquitin/ISG15 ligase TRIM25-like. (551 aa)
rad18E3 ubiquitin-protein ligase RAD18 isoform X1. (454 aa)
LOC108277775Tripartite motif-containing protein 16-like isoform X2. (556 aa)
cul4bcullin-4B; Belongs to the cullin family. (854 aa)
usp31LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 31; Belongs to the peptidase C19 family. (1282 aa)
LOC108259858E3 ubiquitin/ISG15 ligase TRIM25-like. (569 aa)
rfc5Replication factor C subunit 5. (339 aa)
ufd1Ubiquitin fusion degradation protein 1 homolog isoform X2. (308 aa)
wdr48WD repeat-containing protein 48 isoform X1. (681 aa)
rfc2Replication factor C subunit 2. (357 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (297 aa)
LOC108277007E3 ubiquitin/ISG15 ligase TRIM25-like. (228 aa)
LOC108269710E3 ubiquitin-protein ligase TRIM39-like isoform X1. (584 aa)
ENSIPUP00000016302annotation not available (413 aa)
LOC108257761Tripartite motif-containing protein 16-like isoform X2. (573 aa)
LOC108257762E3 ubiquitin/ISG15 ligase TRIM25-like. (557 aa)
cul4acullin-4A; Belongs to the cullin family. (741 aa)
LOC108261673E3 ubiquitin-protein ligase TRIM39-like. (528 aa)
rfc3Replication factor C subunit 3. (356 aa)
rchy1RING finger and CHY zinc finger domain-containing protein 1. (240 aa)
poliDNA polymerase iota. (662 aa)
pold1DNA polymerase. (1066 aa)
rbx1E3 ubiquitin-protein ligase RBX1. (108 aa)
LOC108260776Butyrophilin subfamily 1 member A1-like isoform X1. (494 aa)
LOC108273255ATPase family AAA domain-containing protein 5-like. (927 aa)
dtlDenticleless protein homolog isoform X1. (630 aa)
LOC108273772Uncharacterized protein LOC108273772. (656 aa)
ENSIPUP00000032450annotation not available (615 aa)
LOC108279000E3 ubiquitin-protein ligase RBX1-like. (108 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2286 aa)
LOC108261094Zinc finger protein RFP-like isoform X3. (423 aa)
rcbtb1RCC1 and BTB domain-containing protein 1. (531 aa)
LOC108267740E3 ubiquitin-protein ligase TRIM39-like. (533 aa)
ENSIPUP00000030389annotation not available (418 aa)
LOC108267739E3 ubiquitin-protein ligase TRIM39-like. (554 aa)
LOC108267241E3 ubiquitin-protein ligase TRIM39-like. (529 aa)
LOC108267738E3 ubiquitin-protein ligase TRIM39-like isoform X2. (557 aa)
rcbtb2RCC1 and BTB domain-containing protein 2. (540 aa)
LOC108278809Ubiquitin-conjugating enzyme E2 B-like isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
ENSIPUP00000014965annotation not available (667 aa)
LOC108278027Tripartite motif-containing protein 16-like. (562 aa)
LOC108275265Uncharacterized protein LOC108275265. (558 aa)
ENSIPUP00000014037annotation not available (556 aa)
LOC108256816Tripartite motif-containing protein 16-like protein. (553 aa)
LOC108260925E3 ubiquitin-protein ligase TRIM21-like. (383 aa)
LOC108260924E3 ubiquitin-protein ligase TRIM39-like. (589 aa)
LOC108260922E3 ubiquitin-protein ligase TRIM39-like. (592 aa)
LOC108260923E3 ubiquitin-protein ligase TRIM39-like. (561 aa)
LOC108268031WD repeat-containing protein 48 isoform X1. (677 aa)
ENSIPUP00000012592annotation not available (227 aa)
LOC108260233Tripartite motif-containing protein 16-like. (576 aa)
usp43Ubiquitin carboxyl-terminal hydrolase 43; Belongs to the peptidase C19 family. (1216 aa)
ENSIPUP00000012150annotation not available (407 aa)
LOC108267985Butyrophilin subfamily 1 member A1-like isoform X1. (430 aa)
LOC108267982Butyrophilin subfamily 1 member A1-like isoform X2. (480 aa)
LOC108267983Butyrophilin subfamily 1 member A1-like isoform X1. (495 aa)
LOC108261393Nuclear factor 7, brain-like. (543 aa)
vcpTransitional Endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (806 aa)
LOC108280683Tripartite motif-containing protein 16-like protein. (575 aa)
LOC108280685E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1. (432 aa)
pole3DNA polymerase epsilon subunit 3. (149 aa)
mad2l2Mitotic Spindle assembly checkpoint protein MAD2B. (215 aa)
LOC108271213C-C motif chemokine 20-like. (127 aa)
pole4DNA polymerase epsilon subunit 4. (125 aa)
nploc4Nuclear protein localization protein 4 homolog. (502 aa)
LOC108267123Tripartite motif-containing protein 16-like. (493 aa)
LOC108267709Tripartite motif-containing protein 16-like. (480 aa)
LOC108267929-3Butyrophilin subfamily 1 member A1-like isoform X2. (281 aa)
ENSIPUP00000010053annotation not available (227 aa)
LOC108267929-2Butyrophilin subfamily 1 member A1-like isoform X16. (240 aa)
LOC108261256E3 ubiquitin/ISG15 ligase TRIM25-like. (544 aa)
ENSIPUP00000009909annotation not available (231 aa)
LOC108267929Butyrophilin subfamily 1 member A1-like isoform X28. (474 aa)
LOC108267939Butyrophilin subfamily 1 member A1-like. (305 aa)
usp1Ubiquitin carboxyl-terminal hydrolase. (765 aa)
LOC108265344E3 ubiquitin/ISG15 ligase TRIM25-like. (548 aa)
LOC108267931E3 ubiquitin-protein ligase TRIM39-like isoform X1. (528 aa)
LOC108267941E3 ubiquitin-protein ligase TRIM39-like. (427 aa)
LOC108267938E3 ubiquitin-protein ligase TRIM39-like. (532 aa)
ENSIPUP00000008611annotation not available (380 aa)
usp10Ubiquitin carboxyl-terminal hydrolase. (870 aa)
LOC108267937E3 ubiquitin-protein ligase TRIM39-like. (550 aa)
ENSIPUP00000008476annotation not available (218 aa)
LOC108267936E3 ubiquitin-protein ligase TRIM39-like. (550 aa)
ddb1DNA damage-binding protein 1. (1140 aa)
kxd1kxDL motif-containing protein 1 isoform X2. (187 aa)
LOC108263523Tripartite motif-containing protein 16-like. (496 aa)
LOC108258556E3 ubiquitin/ISG15 ligase TRIM25-like. (558 aa)
LOC108258555E3 ubiquitin/ISG15 ligase TRIM25-like. (551 aa)
uba52ubiquitin-60S ribosomal protein L40 isoform X1. (128 aa)
LOC108258552Tripartite motif-containing protein 16-like isoform X2. (557 aa)
LOC108258557E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1. (557 aa)
LOC108258561E3 ubiquitin/ISG15 ligase TRIM25-like. (570 aa)
ENSIPUP00000007038annotation not available (244 aa)
ENSIPUP00000006392annotation not available (60 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (606 aa)
LOC108260320Tripartite motif-containing protein 16-like protein isoform X1. (451 aa)
ENSIPUP00000006354Tripartite motif containing 25, like. (713 aa)
rev1DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1238 aa)
rfc1Replication factor C subunit 1. (1129 aa)
pold2DNA polymerase delta subunit 2. (467 aa)
pold3DNA polymerase delta subunit 3 isoform X1. (471 aa)
meiobMeiosis-specific with OB domain-containing protein. (466 aa)
ENSIPUP00000001934annotation not available (61 aa)
LOC108275737Tripartite motif-containing protein 16-like protein isoform X1. (593 aa)
ENSIPUP00000000970annotation not available (517 aa)
spata5Spermatogenesis-associated protein 5. (796 aa)
LOC108262433E3 ubiquitin/ISG15 ligase TRIM25-like. (203 aa)
LOC108268261E3 ubiquitin/ISG15 ligase TRIM25-like. (243 aa)
ENSIPUP00000020157annotation not available (211 aa)
ENSIPUP00000020283E3 ubiquitin/ISG15 ligase TRIM25-like. (249 aa)
ENSIPUP00000020309annotation not available (198 aa)
LOC108268233E3 ubiquitin-protein ligase TRIM39-like isoform X1. (544 aa)
LOC108268229E3 ubiquitin-protein ligase TRIM39-like. (554 aa)
LOC108268240Zinc finger protein RFP-like isoform X1. (374 aa)
LOC108257613Tripartite motif-containing protein 16-like isoform X2. (632 aa)
LOC108257788Tripartite motif-containing protein 16-like. (353 aa)
LOC108257667E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1. (541 aa)
LOC108268241Tripartite motif-containing protein 16-like. (266 aa)
pold4DNA polymerase delta subunit 4. (109 aa)
LOC108268236E3 ubiquitin-protein ligase TRIM39-like. (528 aa)
LOC108268232E3 ubiquitin-protein ligase TRIM39-like isoform X2. (534 aa)
LOC108268232-2E3 ubiquitin-protein ligase TRIM39-like isoform X1. (545 aa)
LOC108257886Tripartite motif-containing protein 16-like protein. (560 aa)
rpa2Replication protein A 32 kDa subunit. (294 aa)
ENSIPUP00000021907annotation not available (183 aa)
LOC108268234E3 ubiquitin-protein ligase TRIM39-like isoform X1. (543 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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