STRINGSTRING
uba52 uba52 csde1 csde1 cdk4 cdk4 dok1 dok1 elmod1 elmod1 nrg1 nrg1 LOC108268830 LOC108268830 elmod3 elmod3 LOC108263182 LOC108263182 egf egf LOC108278992 LOC108278992 rnf222 rnf222 LOC108274959 LOC108274959 khdrbs3 khdrbs3 LOC108265420 LOC108265420 LOC108258402 LOC108258402 kxd1 kxd1 LOC108259077 LOC108259077 dock1 dock1 elmod2 elmod2 crk crk hras hras LOC108258873 LOC108258873 erbb4 erbb4 akt3 akt3 socs3 socs3 egfr egfr nras nras LOC108276248 LOC108276248 cbl cbl LOC108276246 LOC108276246 cdkn1b cdkn1b elmo3 elmo3 cdk2 cdk2 LOC108269225 LOC108269225 LOC108265409 LOC108265409 sfpq sfpq LOC108258933 LOC108258933 rasa1 rasa1 ccne1 ccne1 khdrbs1 khdrbs1 CRK CRK ccnd1 ccnd1 LOC108265853 LOC108265853 LOC108274104 LOC108274104 rps27a rps27a khdrbs2 khdrbs2 LOC108280031 LOC108280031 LOC108280350 LOC108280350 stap2 stap2 LOC108268609 LOC108268609 nono nono LOC108278862 LOC108278862 ENSIPUP00000027998 ENSIPUP00000027998 LOC108260288 LOC108260288 erbb3 erbb3 LOC108263614 LOC108263614 LOC108273851 LOC108273851 tgfb1i1 tgfb1i1 nrg4 nrg4 ENSIPUP00000032353 ENSIPUP00000032353 LOC108262175 LOC108262175 LOC108259582 LOC108259582 lrrk2 lrrk2 LOC108257187 LOC108257187 arhgap35 arhgap35 LOC108258948 LOC108258948 LOC108278233 LOC108278233 nrg2 nrg2 LOC108271615 LOC108271615 hbegf hbegf elmo2 elmo2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uba52ubiquitin-60S ribosomal protein L40 isoform X1. (128 aa)
csde1Cold shock domain-containing protein E1 isoform X6. (767 aa)
cdk4Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily. (302 aa)
dok1Docking protein 1. (588 aa)
elmod1ELMO domain-containing protein 1 isoform X2. (351 aa)
nrg1Pro-neuregulin-1, membrane-bound isoform isoform X2. (597 aa)
LOC108268830Pro-neuregulin-2, membrane-bound isoform-like isoform X1. (708 aa)
elmod3ELMO domain-containing protein 3 isoform X2. (405 aa)
LOC108263182Engulfment and cell motility protein 1-like. (212 aa)
egfPro-epidermal growth factor. (936 aa)
LOC108278992Probetacellulin-like isoform X1. (177 aa)
rnf222RING finger protein 222. (199 aa)
LOC108274959GTPase KRas isoform X1. (189 aa)
khdrbs3KH domain-containing, RNA-binding, signal transduction-associated protein 3 isoform X1. (341 aa)
LOC108265420Tyrosine-protein phosphatase non-receptor type. (439 aa)
LOC108258402Receptor protein-tyrosine kinase. (730 aa)
kxd1kxDL motif-containing protein 1 isoform X2. (187 aa)
LOC108259077Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
dock1Dedicator of cytokinesis protein 1; Belongs to the DOCK family. (1862 aa)
elmod2ELMO domain-containing protein 2. (303 aa)
crkAdapter molecule crk. (308 aa)
hrasGTPase HRas. (189 aa)
LOC108258873Receptor tyrosine-protein kinase erbB-4-like. (1315 aa)
erbb4Receptor protein-tyrosine kinase. (1389 aa)
akt3Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (480 aa)
socs3Suppressor of cytokine signaling 3. (201 aa)
egfrReceptor protein-tyrosine kinase. (1199 aa)
nrasGTPase NRas. (195 aa)
LOC108276248Tyrosine-protein kinase. (493 aa)
cblE3 ubiquitin-protein ligase CBL. (911 aa)
LOC108276246Tyrosine-protein kinase. (506 aa)
cdkn1bCyclin-dependent kinase inhibitor 1B. (170 aa)
elmo3Engulfment and cell motility protein 3 isoform X1. (749 aa)
cdk2Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (301 aa)
LOC108269225E3 ubiquitin-protein ligase CBL-like isoform X1. (625 aa)
LOC108265409Uncharacterized protein LOC108265409. (489 aa)
sfpqSplicing factor, proline- and glutamine-rich isoform X2. (586 aa)
LOC108258933Paraspeckle component 1-like isoform X2. (523 aa)
rasa1Ras GTPase-activating protein 1. (1024 aa)
ccne1G1/S-specific cyclin-E1 isoform X2; Belongs to the cyclin family. (404 aa)
khdrbs1KH domain-containing, RNA-binding, signal transduction-associated protein 1. (350 aa)
CRKAdapter molecule crk-like. (357 aa)
ccnd1G1/S-specific cyclin-D1; Belongs to the cyclin family. (292 aa)
LOC108265853Leupaxin-like isoform X2. (401 aa)
LOC108274104Suppressor of cytokine signaling 3-like. (223 aa)
rps27aUbiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...] (156 aa)
khdrbs2KH domain-containing, RNA-binding, signal transduction-associated protein 2. (349 aa)
LOC108280031Cyclin-dependent kinase inhibitor 1B-like. (157 aa)
LOC108280350Signal-transducing adaptor protein 2-like isoform X2. (369 aa)
stap2Signal-transducing adaptor protein 2. (416 aa)
LOC108268609Proheparin-binding EGF-like growth factor. (235 aa)
nononon-POU domain-containing octamer-binding protein. (436 aa)
LOC108278862arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1. (114 aa)
ENSIPUP00000027998annotation not available (55 aa)
LOC108260288Rho GTPase-activating protein 35-like. (1511 aa)
erbb3Receptor tyrosine-protein kinase erbB-3 isoform X2. (1415 aa)
LOC108263614KH domain-containing, RNA-binding, signal transduction-associated protein 1-like. (414 aa)
LOC108273851Receptor protein-tyrosine kinase. (1262 aa)
tgfb1i1Transforming growth factor beta-1-induced transcript 1 protein isoform X1; Belongs to the paxillin family. (476 aa)
nrg4Pro-neuregulin-4, membrane-bound isoform isoform X1. (99 aa)
ENSIPUP00000032353annotation not available (90 aa)
LOC108262175Pro-neuregulin-3, membrane-bound isoform-like isoform X3. (347 aa)
LOC108259582GTPase HRas. (189 aa)
lrrk2Leucine-rich repeat serine/threonine-protein kinase 2 isoform X1. (2455 aa)
LOC108257187Engulfment and cell motility protein 1 isoform X1. (726 aa)
arhgap35Rho GTPase-activating protein 35. (1538 aa)
LOC108258948GTPase HRas-like isoform X2. (187 aa)
LOC108278233Beta-crystallin B1-like; Belongs to the beta/gamma-crystallin family. (209 aa)
nrg2Pro-neuregulin-2, membrane-bound isoform isoform X4. (737 aa)
LOC108271615Receptor tyrosine-protein kinase erbB-3-like. (1309 aa)
hbegfProheparin-binding EGF-like growth factor. (229 aa)
elmo2Engulfment and cell motility protein 2 isoform X1. (711 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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