22 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

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protein homology

Your Input:
	marchf9	E3 ubiquitin-protein ligase MARCH9. (337 aa)
	LOC108266228	UDP-glucose:glycoprotein glucosyltransferase 2-like isoform X2. (1493 aa)
	edem1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (626 aa)
	man1b1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (631 aa)
	kxd1	kxDL motif-containing protein 1 isoform X2. (187 aa)
	marchf4	E3 ubiquitin-protein ligase MARCH4. (351 aa)
	rnf139	E3 ubiquitin-protein ligase RNF139. (673 aa)
	uggt1	UDP-glucose:glycoprotein glucosyltransferase 1. (1540 aa)
	LOC108279191	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (855 aa)
	LOC108279088	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (657 aa)
	rnf103	E3 ubiquitin-protein ligase RNF103. (658 aa)
	edem3	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (888 aa)
	rps27a	Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...] (156 aa)
	marchf7	E3 ubiquitin-protein ligase MARCH7 isoform X1. (824 aa)
	marchf2	E3 ubiquitin-protein ligase MARCH2. (246 aa)
	marchf3	E3 ubiquitin-protein ligase MARCH3. (272 aa)
	marchf1	E3 ubiquitin-protein ligase MARCH1 isoform X1. (434 aa)
	uba52	ubiquitin-60S ribosomal protein L40 isoform X1. (128 aa)
	edem2	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (572 aa)
	marchf8	E3 ubiquitin-protein ligase MARCH8 isoform X1. (285 aa)
	marchf6	E3 ubiquitin-protein ligase MARCH6. (914 aa)
	LOC108258493	E3 ubiquitin-protein ligase MARCH4-like isoform X1. (394 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108266228	edem1	ENSIPUP00000001456	ENSIPUP00000001280	UDP-glucose:glycoprotein glucosyltransferase 2-like isoform X2.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.462
LOC108266228	edem2	ENSIPUP00000001456	ENSIPUP00000007065	UDP-glucose:glycoprotein glucosyltransferase 2-like isoform X2.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.506
LOC108279088	man1b1	ENSIPUP00000013390	ENSIPUP00000007909	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.901
edem1	LOC108266228	ENSIPUP00000001280	ENSIPUP00000001456	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose:glycoprotein glucosyltransferase 2-like isoform X2.	0.462
edem1	uggt1	ENSIPUP00000001280	ENSIPUP00000011637	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose:glycoprotein glucosyltransferase 1.	0.462
edem2	LOC108266228	ENSIPUP00000007065	ENSIPUP00000001456	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose:glycoprotein glucosyltransferase 2-like isoform X2.	0.506
edem2	uggt1	ENSIPUP00000007065	ENSIPUP00000011637	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose:glycoprotein glucosyltransferase 1.	0.506
kxd1	rps27a	ENSIPUP00000008247	ENSIPUP00000022626	kxDL motif-containing protein 1 isoform X2.	Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...]	0.802
kxd1	uba52	ENSIPUP00000008247	ENSIPUP00000007381	kxDL motif-containing protein 1 isoform X2.	ubiquitin-60S ribosomal protein L40 isoform X1.	0.715
man1b1	LOC108279088	ENSIPUP00000007909	ENSIPUP00000013390	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.901
marchf6	rnf139	ENSIPUP00000006601	ENSIPUP00000010691	E3 ubiquitin-protein ligase MARCH6.	E3 ubiquitin-protein ligase RNF139.	0.623
rnf103	rps27a	ENSIPUP00000019836	ENSIPUP00000022626	E3 ubiquitin-protein ligase RNF103.	Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...]	0.599
rnf103	uba52	ENSIPUP00000019836	ENSIPUP00000007381	E3 ubiquitin-protein ligase RNF103.	ubiquitin-60S ribosomal protein L40 isoform X1.	0.517
rnf139	marchf6	ENSIPUP00000010691	ENSIPUP00000006601	E3 ubiquitin-protein ligase RNF139.	E3 ubiquitin-protein ligase MARCH6.	0.623
rnf139	rps27a	ENSIPUP00000010691	ENSIPUP00000022626	E3 ubiquitin-protein ligase RNF139.	Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...]	0.665
rnf139	uba52	ENSIPUP00000010691	ENSIPUP00000007381	E3 ubiquitin-protein ligase RNF139.	ubiquitin-60S ribosomal protein L40 isoform X1.	0.534
rps27a	kxd1	ENSIPUP00000022626	ENSIPUP00000008247	Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...]	kxDL motif-containing protein 1 isoform X2.	0.802
rps27a	rnf103	ENSIPUP00000022626	ENSIPUP00000019836	Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...]	E3 ubiquitin-protein ligase RNF103.	0.599
rps27a	rnf139	ENSIPUP00000022626	ENSIPUP00000010691	Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...]	E3 ubiquitin-protein ligase RNF139.	0.665
rps27a	uba52	ENSIPUP00000022626	ENSIPUP00000007381	Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...]	ubiquitin-60S ribosomal protein L40 isoform X1.	0.999