STRINGSTRING
LOC108272015 LOC108272015 LOC108267831 LOC108267831 LOC108255212 LOC108255212 LOC108256914 LOC108256914 park7 park7 ift88 ift88 LOC108271647 LOC108271647 ENSIPUP00000006147 ENSIPUP00000006147 ENSIPUP00000006161 ENSIPUP00000006161 LOC108258562 LOC108258562 tubb tubb uba52 uba52 LOC108265838 LOC108265838 kxd1 kxd1 ub2v1 ub2v1 LOC108265894 LOC108265894 tubb3 tubb3 LOC108257393 LOC108257393 cetn1 cetn1 LOC108260450 LOC108260450 LOC108268328 LOC108268328 LOC108278758 LOC108278758 ENSIPUP00000014279 ENSIPUP00000014279 ENSIPUP00000014290 ENSIPUP00000014290 LOC108258713 LOC108258713 LOC108266769 LOC108266769 tubb1 tubb1 prkn prkn ENSIPUP00000016218 ENSIPUP00000016218 LOC108257478 LOC108257478 vim vim LOC108273468 LOC108273468 LOC108255233 LOC108255233 LOC108255063 LOC108255063 hdac6 hdac6 LOC108258863 LOC108258863 dync1li2 dync1li2 rps27a rps27a tube1 tube1 LOC108263943 LOC108263943 LOC108278211 LOC108278211 LOC108255360 LOC108255360 LOC108255957 LOC108255957 LOC108262309 LOC108262309 LOC108277449 LOC108277449 ube2n ube2n ENSIPUP00000025854 ENSIPUP00000025854 LOC108272725 LOC108272725 LOC108261046 LOC108261046 cetn3 cetn3 LOC108269625 LOC108269625 LOC108269062 LOC108269062 dyl1 dyl1 dync1i2 dync1i2 LOC108268620 LOC108268620 LOC108275941 LOC108275941 LOC108275942 LOC108275942 LOC108275946 LOC108275946 LOC108275946-2 LOC108275946-2 LOC108274545 LOC108274545 dync1i1 dync1i1 cftr cftr arl13b arl13b LOC108277165 LOC108277165 LOC108278890 LOC108278890
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108272015Tubulin beta-5 chain. (139 aa)
LOC108267831Cytoplasmic dynein 1 intermediate chain 1-like isoform X2. (614 aa)
LOC108255212Ubiquitin-conjugating enzyme E2 variant 1. (147 aa)
LOC108256914Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (464 aa)
park7Protein deglycase DJ-1. (189 aa)
ift88Intraflagellar transport protein 88 homolog. (824 aa)
LOC108271647Cytoplasmic dynein 1 intermediate chain 2-like isoform X1. (655 aa)
ENSIPUP00000006147annotation not available (139 aa)
ENSIPUP00000006161annotation not available (142 aa)
LOC108258562Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
tubbTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
uba52ubiquitin-60S ribosomal protein L40 isoform X1. (128 aa)
LOC108265838Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
kxd1kxDL motif-containing protein 1 isoform X2. (187 aa)
ub2v1Ubiquitin-conjugating enzyme E2 variant 1. (147 aa)
LOC108265894Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
tubb3Tubulin beta-3 chain; Belongs to the tubulin family. (450 aa)
LOC108257393Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
cetn1Centrin-1. (186 aa)
LOC108260450Tubulin beta-4B chain. (442 aa)
LOC108268328Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC108278758Dynein light chain 2, cytoplasmic-like. (135 aa)
ENSIPUP00000014279annotation not available (281 aa)
ENSIPUP00000014290annotation not available (170 aa)
LOC108258713Tubulin beta-4B chain-like. (146 aa)
LOC108266769Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (476 aa)
tubb1Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (465 aa)
prknParkin RBR E3 ubiquitin protein ligase. (330 aa)
ENSIPUP00000016218annotation not available (253 aa)
LOC108257478Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (467 aa)
vimVimentin; Belongs to the intermediate filament family. (458 aa)
LOC108273468Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC108255233Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (505 aa)
LOC108255063Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
hdac6Histone deacetylase 6. (1103 aa)
LOC108258863Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
dync1li2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (462 aa)
rps27aUbiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...] (156 aa)
tube1LOW QUALITY PROTEIN: tubulin epsilon chain; Belongs to the tubulin family. (439 aa)
LOC108263943Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC108278211Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC108255360Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
LOC108255957Tubulin beta-4B chain-like. (444 aa)
LOC108262309Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
LOC108277449Dynein light chain. (89 aa)
ube2nUbiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
ENSIPUP00000025854annotation not available (61 aa)
LOC108272725Pericentrin-like isoform X6. (4202 aa)
LOC108261046Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (443 aa)
cetn3Centrin-3 isoform X2. (208 aa)
LOC108269625Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (433 aa)
LOC108269062Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
dyl1Dynein light chain. (89 aa)
dync1i2Cytoplasmic dynein 1 intermediate chain 2 isoform X1. (626 aa)
LOC108268620Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (646 aa)
LOC108275941Tubulin alpha-1B chain. (471 aa)
LOC108275942Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC108275946Tubulin alpha-1A chain. (451 aa)
LOC108275946-2Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC108274545A-kinase anchor protein 9-like. (1124 aa)
dync1i1Cytoplasmic dynein 1 intermediate chain 1 isoform X2. (628 aa)
cftrCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1479 aa)
arl13bADP-ribosylation factor-like protein 13B isoform X3. (426 aa)
LOC108277165Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
LOC108278890Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.