34 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	abhd17c	Protein ABHD17C isoform X1. (294 aa)
	LOC108276767	Golgin subfamily A member 7-like. (144 aa)
	csde1	Cold shock domain-containing protein E1 isoform X6. (767 aa)
	LOC108263631	Golgin subfamily A member 7B-like isoform X1. (326 aa)
	usp42	Ubiquitin carboxyl-terminal hydrolase 42 isoform X1; Belongs to the peptidase C19 family. (211 aa)
	ENSIPUP00000004606	annotation not available (95 aa)
	arl2	ADP-ribosylation factor-like protein 2 isoform X1; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	LOC108274959	GTPase KRas isoform X1. (189 aa)
	bcl2	Apoptosis regulator Bcl-2. (204 aa)
	kxd1	kxDL motif-containing protein 1 isoform X2. (187 aa)
	hras	GTPase HRas. (189 aa)
	LOC108258056	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (482 aa)
	prkcq	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (727 aa)
	LOC108258460	Golgin subfamily A member 7B-like isoform X3. (173 aa)
	pde6d	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...] (150 aa)
	zdhhc14	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (484 aa)
	usp36	Ubiquitin carboxyl-terminal hydrolase 36 isoform X1; Belongs to the peptidase C19 family. (1135 aa)
	nras	GTPase NRas. (195 aa)
	LOC108273294	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (383 aa)
	bcl2l1	Bcl-2-like protein 1. (242 aa)
	rps27a	Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be invo [...] (156 aa)
	ABHD17A	Protein ABHD17A-like isoform X1. (394 aa)
	LOC108280794	Protein ABHD17A-like. (319 aa)
	lypla1	Acyl-protein thioesterase 1 isoform X1. (229 aa)
	zdhhc18	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (467 aa)
	rce1	CAAX prenyl protease 2. (322 aa)
	zdhhc9	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (383 aa)
	LOC108257588	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (469 aa)
	churc1	Protein Churchill. (112 aa)
	icmt	Protein-S-isoprenylcysteine O-methyltransferase. (292 aa)
	fnta	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha. (365 aa)
	abhd17b	Protein ABHD17B. (288 aa)
	LOC108259582	GTPase HRas. (189 aa)
	LOC108258948	GTPase HRas-like isoform X2. (187 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABHD17A	lypla1	ENSIPUP00000022935	ENSIPUP00000023977	Protein ABHD17A-like isoform X1.	Acyl-protein thioesterase 1 isoform X1.	0.552
ENSIPUP00000004606	rce1	ENSIPUP00000004606	ENSIPUP00000026373	annotation not available	CAAX prenyl protease 2.	0.659
LOC108257588	LOC108258948	ENSIPUP00000028438	ENSIPUP00000034432	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	GTPase HRas-like isoform X2.	0.506
LOC108257588	LOC108259582	ENSIPUP00000028438	ENSIPUP00000033492	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	GTPase HRas.	0.506
LOC108257588	LOC108274959	ENSIPUP00000028438	ENSIPUP00000006166	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	GTPase KRas isoform X1.	0.506
LOC108257588	csde1	ENSIPUP00000028438	ENSIPUP00000000460	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Cold shock domain-containing protein E1 isoform X6.	0.506
LOC108257588	fnta	ENSIPUP00000028438	ENSIPUP00000030922	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.	0.997
LOC108257588	hras	ENSIPUP00000028438	ENSIPUP00000008931	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	GTPase HRas.	0.506
LOC108257588	icmt	ENSIPUP00000028438	ENSIPUP00000029617	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Protein-S-isoprenylcysteine O-methyltransferase.	0.545
LOC108257588	nras	ENSIPUP00000028438	ENSIPUP00000015383	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	GTPase NRas.	0.506
LOC108257588	rce1	ENSIPUP00000028438	ENSIPUP00000026373	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	CAAX prenyl protease 2.	0.980
LOC108258056	LOC108258460	ENSIPUP00000009074	ENSIPUP00000011721	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	Golgin subfamily A member 7B-like isoform X3.	0.577
LOC108258056	LOC108263631	ENSIPUP00000009074	ENSIPUP00000000472	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	Golgin subfamily A member 7B-like isoform X1.	0.577
LOC108258056	LOC108276767	ENSIPUP00000009074	ENSIPUP00000036581	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	Golgin subfamily A member 7-like.	0.588
LOC108258460	LOC108258056	ENSIPUP00000011721	ENSIPUP00000009074	Golgin subfamily A member 7B-like isoform X3.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.577
LOC108258460	LOC108258948	ENSIPUP00000011721	ENSIPUP00000034432	Golgin subfamily A member 7B-like isoform X3.	GTPase HRas-like isoform X2.	0.411
LOC108258460	LOC108259582	ENSIPUP00000011721	ENSIPUP00000033492	Golgin subfamily A member 7B-like isoform X3.	GTPase HRas.	0.411
LOC108258460	LOC108273294	ENSIPUP00000011721	ENSIPUP00000015792	Golgin subfamily A member 7B-like isoform X3.	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.	0.577
LOC108258460	LOC108274959	ENSIPUP00000011721	ENSIPUP00000006166	Golgin subfamily A member 7B-like isoform X3.	GTPase KRas isoform X1.	0.411
LOC108258460	csde1	ENSIPUP00000011721	ENSIPUP00000000460	Golgin subfamily A member 7B-like isoform X3.	Cold shock domain-containing protein E1 isoform X6.	0.411