17 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108269944	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family. (381 aa)
	ubr1	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1744 aa)
	tmem179	Transmembrane protein 179. (233 aa)
	arf6	ADP-ribosylation factor 6 isoform X1; Belongs to the small GTPase superfamily. Arf family. (161 aa)
	ckmt2	Creatine kinase S-type, mitochondrial isoform X1; Belongs to the ATP:guanido phosphotransferase family. (416 aa)
	LOC100304493	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family. (449 aa)
	LOC108269665	Photoreceptor outer segment membrane glycoprotein 2-like. (363 aa)
	LOC108258119	Photoreceptor outer segment membrane glycoprotein 2-like. (355 aa)
	LOC108257851	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family. (381 aa)
	ckm	Creatine kinase M-type; Belongs to the ATP:guanido phosphotransferase family. (380 aa)
	LOC108263462	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family. (389 aa)
	kcrb	Creatine kinase B-type; Belongs to the ATP:guanido phosphotransferase family. (403 aa)
	LOC108268389	Creatine kinase U-type, mitochondrial-like; Belongs to the ATP:guanido phosphotransferase family. (416 aa)
	LOC108263301	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family. (388 aa)
	LOC108271265	Creatine kinase, testis isozyme-like isoform X1; Belongs to the ATP:guanido phosphotransferase family. (401 aa)
	npas3	Neuronal PAS domain-containing protein 3 isoform X1. (973 aa)
	edrf1	Erythroid differentiation-related factor 1. (1233 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100304493	LOC108257851	ENSIPUP00000027912	ENSIPUP00000026279	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family.	0.612
LOC100304493	LOC108263301	ENSIPUP00000027912	ENSIPUP00000003303	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family.	0.410
LOC100304493	LOC108263462	ENSIPUP00000027912	ENSIPUP00000008095	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family.	0.410
LOC100304493	LOC108269944	ENSIPUP00000027912	ENSIPUP00000001162	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family.	0.410
LOC100304493	LOC108271265	ENSIPUP00000027912	ENSIPUP00000003048	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase, testis isozyme-like isoform X1; Belongs to the ATP:guanido phosphotransferase family.	0.452
LOC100304493	kcrb	ENSIPUP00000027912	ENSIPUP00000005149	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase B-type; Belongs to the ATP:guanido phosphotransferase family.	0.410
LOC108257851	LOC100304493	ENSIPUP00000026279	ENSIPUP00000027912	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family.	0.612
LOC108258119	arf6	ENSIPUP00000027614	ENSIPUP00000030104	Photoreceptor outer segment membrane glycoprotein 2-like.	ADP-ribosylation factor 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.	0.659
LOC108258119	edrf1	ENSIPUP00000027614	ENSIPUP00000001203	Photoreceptor outer segment membrane glycoprotein 2-like.	Erythroid differentiation-related factor 1.	0.565
LOC108258119	npas3	ENSIPUP00000027614	ENSIPUP00000001470	Photoreceptor outer segment membrane glycoprotein 2-like.	Neuronal PAS domain-containing protein 3 isoform X1.	0.607
LOC108258119	tmem179	ENSIPUP00000027614	ENSIPUP00000000929	Photoreceptor outer segment membrane glycoprotein 2-like.	Transmembrane protein 179.	0.600
LOC108258119	ubr1	ENSIPUP00000027614	ENSIPUP00000000843	Photoreceptor outer segment membrane glycoprotein 2-like.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.631
LOC108263301	LOC100304493	ENSIPUP00000003303	ENSIPUP00000027912	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family.	0.410
LOC108263462	LOC100304493	ENSIPUP00000008095	ENSIPUP00000027912	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family.	0.410
LOC108269665	arf6	ENSIPUP00000000917	ENSIPUP00000030104	Photoreceptor outer segment membrane glycoprotein 2-like.	ADP-ribosylation factor 6 isoform X1; Belongs to the small GTPase superfamily. Arf family.	0.661
LOC108269665	edrf1	ENSIPUP00000000917	ENSIPUP00000001203	Photoreceptor outer segment membrane glycoprotein 2-like.	Erythroid differentiation-related factor 1.	0.565
LOC108269665	npas3	ENSIPUP00000000917	ENSIPUP00000001470	Photoreceptor outer segment membrane glycoprotein 2-like.	Neuronal PAS domain-containing protein 3 isoform X1.	0.607
LOC108269665	tmem179	ENSIPUP00000000917	ENSIPUP00000000929	Photoreceptor outer segment membrane glycoprotein 2-like.	Transmembrane protein 179.	0.600
LOC108269665	ubr1	ENSIPUP00000000917	ENSIPUP00000000843	Photoreceptor outer segment membrane glycoprotein 2-like.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.631
LOC108269944	LOC100304493	ENSIPUP00000001162	ENSIPUP00000027912	Creatine kinase B-type-like; Belongs to the ATP:guanido phosphotransferase family.	Creatine kinase; Belongs to the ATP:guanido phosphotransferase family.	0.410