STRINGSTRING
hdlbp hdlbp tafa5 tafa5 LOC108273755 LOC108273755 rad23b rad23b bax bax pigb pigb LOC108274750 LOC108274750 LOC108270970 LOC108270970 cop1 cop1 chst11 chst11 tp53 tp53 LOC108272443 LOC108272443 LOC108259599 LOC108259599
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hdlbpVigilin isoform X1. (1283 aa)
tafa5Protein FAM19A5 isoform X1. (133 aa)
LOC108273755Vigilin-like. (1266 aa)
rad23bUV excision repair protein RAD23 homolog B. (384 aa)
baxApoptosis regulator BAX. (189 aa)
pigbMannosyltransferase. (531 aa)
LOC108274750Apoptosis regulator BAX-like. (199 aa)
LOC108270970Apoptosis regulator BAX-like. (202 aa)
cop1E3 ubiquitin-protein ligase RFWD2 isoform X1. (692 aa)
chst11Carbohydrate sulfotransferase. (352 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. (376 aa)
LOC108272443Myeloid-associated differentiation marker homolog. (291 aa)
LOC108259599Apoptosis regulator BAX-like isoform X1. (203 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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