STRINGSTRING
bmf bmf LOC100304649 LOC100304649 helq helq bcl2 bcl2 bnip3 bnip3 ctss ctss gapdh gapdh BIRC5 BIRC5 egfr egfr LOC108267470 LOC108267470 LOC100304651 LOC100304651 LOC108267046 LOC108267046 LOC108273098 LOC108273098 LOC100304635 LOC100304635 LOC108259599 LOC108259599 LOC108273129 LOC108273129 BAX BAX bax bax nod2 nod2 LOC108266930 LOC108266930 casp9 casp9 tp53 tp53 LOC108274831 LOC108274831 LOC108264602 LOC108264602
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bmfBcl-2-modifying factor. (152 aa)
LOC100304649Granzyme B; Belongs to the peptidase S1 family. (253 aa)
helqHelicase POLQ-like isoform X1. (998 aa)
bcl2Apoptosis regulator Bcl-2. (204 aa)
bnip3BCL2/adenovirus E1B 19 kDa protein-interacting protein 3. (197 aa)
ctssCathepsin S precursor; Belongs to the peptidase C1 family. (329 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
BIRC5Baculoviral IAP repeat-containing protein 5-like. (190 aa)
egfrReceptor protein-tyrosine kinase. (1199 aa)
LOC108267470Apoptosis regulator Bcl-2-like. (204 aa)
LOC100304651Granzyme-like III precursor; Belongs to the peptidase S1 family. (254 aa)
LOC108267046Granzyme B(G,H)-like; Belongs to the peptidase S1 family. (254 aa)
LOC108273098Caspase-8-like isoform X1; Belongs to the peptidase C14A family. (493 aa)
LOC100304635Caspase 8 isoform X1; Belongs to the peptidase C14A family. (371 aa)
LOC108259599Apoptosis regulator BAX-like isoform X1. (203 aa)
LOC108273129Caspase-8-like; Belongs to the peptidase C14A family. (353 aa)
BAXBCL2 associated X, apoptosis regulator. (176 aa)
baxApoptosis regulator BAX. (189 aa)
nod2Nucleotide-binding oligomerization domain-containing protein 2. (981 aa)
LOC108266930Caspase-8-like isoform X1; Belongs to the peptidase C14A family. (525 aa)
casp9Caspase-9 isoform X2; Belongs to the peptidase C14A family. (432 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. (376 aa)
LOC108274831Cathepsin L1-like isoform X1; Belongs to the peptidase C1 family. (337 aa)
LOC108264602Uncharacterized protein LOC108264602 isoform X1. (210 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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