STRINGSTRING
acadvl acadvl cpt1a cpt1a LOC100305036 LOC100305036 fasn fasn acads acads canx canx LOC108273098 LOC108273098 LOC100304635 LOC100304635 acad9 acad9 LOC108259599 LOC108259599 LOC108268919 LOC108268919 LOC108273129 LOC108273129 LOC108265600 LOC108265600 BAX BAX bax bax atf4 atf4 sirt1 sirt1 LOC100304478 LOC100304478 LOC108266930 LOC108266930 casp9 casp9 plin2 plin2 casp3 casp3 sod2 sod2 LOC108260860 LOC108260860 atf6 atf6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
acadvlVery Long-chain specific Acyl-CoA dehydrogenase, mitochondrial. (660 aa)
cpt1aCarnitine O-palmitoyltransferase 1, liver isoform isoform X1; Belongs to the carnitine/choline acetyltransferase family. (774 aa)
LOC100305036Heat shock cognate 71 kDa protein; Molecular chaperone implicated in a wide variety of cellular processes, including protection of the proteome from stress, folding and transport of newly synthesized polypeptides, activation of proteolysis of misfolded proteins and the formation and dissociation of protein complexes. Plays a pivotal role in the protein quality control system, ensuring the correct folding of proteins, the re-folding of misfolded proteins and controlling the targeting of proteins for subsequent degradation. This is achieved through cycles of ATP binding, ATP hydrolysis a [...] (649 aa)
fasnFatty acid synthase isoform X1. (2501 aa)
acadsShort-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1. (419 aa)
canxCalnexin precursor. (605 aa)
LOC108273098Caspase-8-like isoform X1; Belongs to the peptidase C14A family. (493 aa)
LOC100304635Caspase 8 isoform X1; Belongs to the peptidase C14A family. (371 aa)
acad9Acyl-CoA dehydrogenase family member 9, mitochondrial. (628 aa)
LOC108259599Apoptosis regulator BAX-like isoform X1. (203 aa)
LOC108268919Calnexin-like isoform X1. (529 aa)
LOC108273129Caspase-8-like; Belongs to the peptidase C14A family. (353 aa)
LOC108265600Perilipin; Belongs to the perilipin family. (431 aa)
BAXBCL2 associated X, apoptosis regulator. (176 aa)
baxApoptosis regulator BAX. (189 aa)
atf4Cyclic AMP-dependent transcription factor ATF-4. (421 aa)
sirt1NAD-dependent protein deacetylase sirtuin-1 isoform X3. (731 aa)
LOC100304478Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals; Belongs to the metallothionein superfamily. Type 1 family. (60 aa)
LOC108266930Caspase-8-like isoform X1; Belongs to the peptidase C14A family. (525 aa)
casp9Caspase-9 isoform X2; Belongs to the peptidase C14A family. (432 aa)
plin2Perilipin; Belongs to the perilipin family. (418 aa)
casp3Caspase-3 isoform X1; Belongs to the peptidase C14A family. (285 aa)
sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (224 aa)
LOC108260860Caspase-3-like; Belongs to the peptidase C14A family. (287 aa)
atf6Cyclic AMP-dependent transcription factor ATF-6 alpha. (645 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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