15 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108273898	Interferon regulatory factor 3-like. (462 aa)
	bax	Apoptosis regulator BAX. (189 aa)
	BAX	BCL2 associated X, apoptosis regulator. (176 aa)
	LOC108266215	Uncharacterized protein LOC108266215; Belongs to the Toll-like receptor family. (1041 aa)
	LOC108259599	Apoptosis regulator BAX-like isoform X1. (203 aa)
	LOC108267470	Apoptosis regulator Bcl-2-like. (204 aa)
	myd88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (279 aa)
	tlr3	Toll-like receptor 3 precursor; Belongs to the Toll-like receptor family. (905 aa)
	bcl2	Apoptosis regulator Bcl-2. (204 aa)
	LOC108279129	Toll-like receptor 13. (965 aa)
	ace	Angiotensin-converting enzyme. (1288 aa)
	LOC108265704	Toll-like receptor 9; Belongs to the Toll-like receptor family. (1067 aa)
	LOC108260860	Caspase-3-like; Belongs to the peptidase C14A family. (287 aa)
	casp3	Caspase-3 isoform X1; Belongs to the peptidase C14A family. (285 aa)
	casp9	Caspase-9 isoform X2; Belongs to the peptidase C14A family. (432 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAX	LOC108267470	ENSIPUP00000022885	ENSIPUP00000018003	BCL2 associated X, apoptosis regulator.	Apoptosis regulator Bcl-2-like.	0.623
LOC108259599	LOC108267470	ENSIPUP00000021312	ENSIPUP00000018003	Apoptosis regulator BAX-like isoform X1.	Apoptosis regulator Bcl-2-like.	0.902
LOC108259599	bcl2	ENSIPUP00000021312	ENSIPUP00000006947	Apoptosis regulator BAX-like isoform X1.	Apoptosis regulator Bcl-2.	0.900
LOC108260860	LOC108267470	ENSIPUP00000034973	ENSIPUP00000018003	Caspase-3-like; Belongs to the peptidase C14A family.	Apoptosis regulator Bcl-2-like.	0.624
LOC108260860	bcl2	ENSIPUP00000034973	ENSIPUP00000006947	Caspase-3-like; Belongs to the peptidase C14A family.	Apoptosis regulator Bcl-2.	0.660
LOC108260860	casp3	ENSIPUP00000034973	ENSIPUP00000030411	Caspase-3-like; Belongs to the peptidase C14A family.	Caspase-3 isoform X1; Belongs to the peptidase C14A family.	0.902
LOC108260860	casp9	ENSIPUP00000034973	ENSIPUP00000028681	Caspase-3-like; Belongs to the peptidase C14A family.	Caspase-9 isoform X2; Belongs to the peptidase C14A family.	0.971
LOC108265704	LOC108273898	ENSIPUP00000037354	ENSIPUP00000024255	Toll-like receptor 9; Belongs to the Toll-like receptor family.	Interferon regulatory factor 3-like.	0.590
LOC108265704	myd88	ENSIPUP00000037354	ENSIPUP00000018002	Toll-like receptor 9; Belongs to the Toll-like receptor family.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.982
LOC108266215	LOC108273898	ENSIPUP00000022190	ENSIPUP00000024255	Uncharacterized protein LOC108266215; Belongs to the Toll-like receptor family.	Interferon regulatory factor 3-like.	0.560
LOC108266215	myd88	ENSIPUP00000022190	ENSIPUP00000018002	Uncharacterized protein LOC108266215; Belongs to the Toll-like receptor family.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.982
LOC108267470	BAX	ENSIPUP00000018003	ENSIPUP00000022885	Apoptosis regulator Bcl-2-like.	BCL2 associated X, apoptosis regulator.	0.623
LOC108267470	LOC108259599	ENSIPUP00000018003	ENSIPUP00000021312	Apoptosis regulator Bcl-2-like.	Apoptosis regulator BAX-like isoform X1.	0.902
LOC108267470	LOC108260860	ENSIPUP00000018003	ENSIPUP00000034973	Apoptosis regulator Bcl-2-like.	Caspase-3-like; Belongs to the peptidase C14A family.	0.624
LOC108267470	bax	ENSIPUP00000018003	ENSIPUP00000022942	Apoptosis regulator Bcl-2-like.	Apoptosis regulator BAX.	0.996
LOC108267470	bcl2	ENSIPUP00000018003	ENSIPUP00000006947	Apoptosis regulator Bcl-2-like.	Apoptosis regulator Bcl-2.	0.981
LOC108267470	casp3	ENSIPUP00000018003	ENSIPUP00000030411	Apoptosis regulator Bcl-2-like.	Caspase-3 isoform X1; Belongs to the peptidase C14A family.	0.561
LOC108267470	casp9	ENSIPUP00000018003	ENSIPUP00000028681	Apoptosis regulator Bcl-2-like.	Caspase-9 isoform X2; Belongs to the peptidase C14A family.	0.823
LOC108273898	LOC108265704	ENSIPUP00000024255	ENSIPUP00000037354	Interferon regulatory factor 3-like.	Toll-like receptor 9; Belongs to the Toll-like receptor family.	0.590
LOC108273898	LOC108266215	ENSIPUP00000024255	ENSIPUP00000022190	Interferon regulatory factor 3-like.	Uncharacterized protein LOC108266215; Belongs to the Toll-like receptor family.	0.560