41 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108267566	cyclin-L1-like. (143 aa)
	ccnd1	G1/S-specific cyclin-D1; Belongs to the cyclin family. (292 aa)
	ccnjl	cyclin-J-like protein; Belongs to the cyclin family. (405 aa)
	ccnyl1	cyclin-Y-like protein 1 isoform X2; Belongs to the cyclin family. (339 aa)
	brf1	Transcription factor IIIB 90 kDa subunit. (650 aa)
	ccnb2	G2/mitotic-specific cyclin-B2 isoform X1; Belongs to the cyclin family. (398 aa)
	rbl2	Retinoblastoma-like protein 2 isoform X3. (1079 aa)
	LOC108267136	G2/mitotic-specific cyclin-B3-like isoform X1; Belongs to the cyclin family. (432 aa)
	ccni	cyclin-I isoform X1; Belongs to the cyclin family. (346 aa)
	ccng2	Cyclin-G2; Belongs to the cyclin family. (323 aa)
	ENSIPUP00000033033	annotation not available (184 aa)
	LOC108276423	CDK5 and ABL1 enzyme substrate 2-like isoform X1. (497 aa)
	LOC108275335	G1/S-specific cyclin-E2-like; Belongs to the cyclin family. (392 aa)
	CCNO	cyclin-O; Belongs to the cyclin family. (306 aa)
	ccnq	Cyclin-related protein FAM58A isoform X1; Belongs to the cyclin family. (248 aa)
	ccnj	cyclin-J; Belongs to the cyclin family. (366 aa)
	LOC108258148	Transcription factor IIIB 90 kDa subunit-like. (693 aa)
	LOC108279704	G1/S-specific cyclin-D2-like; Belongs to the cyclin family. (298 aa)
	ccnc	cyclin-C isoform X1; Belongs to the cyclin family. (283 aa)
	ccnd3	G1/S-specific cyclin-D3 isoform X1; Belongs to the cyclin family. (278 aa)
	gtf2b	General transcription factor IIB. (222 aa)
	ccnb1	G2/mitotic-specific cyclin-B1 isoform X2; Belongs to the cyclin family. (401 aa)
	ccna2	cyclin-A2; Belongs to the cyclin family. (423 aa)
	ccnl1	cyclin-L1 isoform X1; Belongs to the cyclin family. (529 aa)
	ccny	cyclin-Y; Belongs to the cyclin family. (349 aa)
	rb1	Retinoblastoma-associated protein. (902 aa)
	CCNE2	G1/S-specific cyclin-E2-like; Belongs to the cyclin family. (379 aa)
	LOC108266529	cyclin-T2-like isoform X5; Belongs to the cyclin family. (617 aa)
	ccnk	cyclin-K; Belongs to the cyclin family. (490 aa)
	rbl1	Retinoblastoma-like protein 1. (1048 aa)
	cables2	CDK5 and ABL1 enzyme substrate 2; Belongs to the cyclin family. (480 aa)
	LOC108280826	G1/S-specific cyclin-D1-like isoform X1; Belongs to the cyclin family. (296 aa)
	ccna1	cyclin-A1 isoform X2; Belongs to the cyclin family. (397 aa)
	cables1	CDK5 and ABL1 enzyme substrate 1 isoform X1. (523 aa)
	ccng1	Cyclin-G1; Belongs to the cyclin family. (299 aa)
	ccnd2	G1/S-specific cyclin-D2; Belongs to the cyclin family. (298 aa)
	ccnf	Cyclin-F; Belongs to the cyclin family. (772 aa)
	LOC108278678	G2/mitotic-specific cyclin-B3-like; Belongs to the cyclin family. (414 aa)
	ccnh	Cyclin-H; Belongs to the cyclin family. (321 aa)
	ccne1	G1/S-specific cyclin-E1 isoform X2; Belongs to the cyclin family. (404 aa)
	ccnt2	cyclin-T2; Belongs to the cyclin family. (558 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCNE2	CCNO	ENSIPUP00000002713	ENSIPUP00000030434	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	cyclin-O; Belongs to the cyclin family.	0.537
CCNE2	LOC108267136	ENSIPUP00000002713	ENSIPUP00000033997	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G2/mitotic-specific cyclin-B3-like isoform X1; Belongs to the cyclin family.	0.557
CCNE2	LOC108275335	ENSIPUP00000002713	ENSIPUP00000030938	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	0.902
CCNE2	LOC108276423	ENSIPUP00000002713	ENSIPUP00000032586	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	CDK5 and ABL1 enzyme substrate 2-like isoform X1.	0.484
CCNE2	LOC108278678	ENSIPUP00000002713	ENSIPUP00000018044	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G2/mitotic-specific cyclin-B3-like; Belongs to the cyclin family.	0.557
CCNE2	LOC108279704	ENSIPUP00000002713	ENSIPUP00000026358	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G1/S-specific cyclin-D2-like; Belongs to the cyclin family.	0.536
CCNE2	LOC108280826	ENSIPUP00000002713	ENSIPUP00000014086	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G1/S-specific cyclin-D1-like isoform X1; Belongs to the cyclin family.	0.436
CCNE2	cables1	ENSIPUP00000002713	ENSIPUP00000015574	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	CDK5 and ABL1 enzyme substrate 1 isoform X1.	0.484
CCNE2	cables2	ENSIPUP00000002713	ENSIPUP00000013346	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	CDK5 and ABL1 enzyme substrate 2; Belongs to the cyclin family.	0.484
CCNE2	ccna1	ENSIPUP00000002713	ENSIPUP00000014172	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	cyclin-A1 isoform X2; Belongs to the cyclin family.	0.761
CCNE2	ccna2	ENSIPUP00000002713	ENSIPUP00000024425	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	cyclin-A2; Belongs to the cyclin family.	0.759
CCNE2	ccnb1	ENSIPUP00000002713	ENSIPUP00000024746	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G2/mitotic-specific cyclin-B1 isoform X2; Belongs to the cyclin family.	0.567
CCNE2	ccnb2	ENSIPUP00000002713	ENSIPUP00000034584	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G2/mitotic-specific cyclin-B2 isoform X1; Belongs to the cyclin family.	0.567
CCNE2	ccnd1	ENSIPUP00000002713	ENSIPUP00000021514	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G1/S-specific cyclin-D1; Belongs to the cyclin family.	0.536
CCNE2	ccnd2	ENSIPUP00000002713	ENSIPUP00000017469	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G1/S-specific cyclin-D2; Belongs to the cyclin family.	0.536
CCNE2	ccnd3	ENSIPUP00000002713	ENSIPUP00000025881	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G1/S-specific cyclin-D3 isoform X1; Belongs to the cyclin family.	0.436
CCNE2	ccne1	ENSIPUP00000002713	ENSIPUP00000020267	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	G1/S-specific cyclin-E1 isoform X2; Belongs to the cyclin family.	0.909
CCNE2	ccnf	ENSIPUP00000002713	ENSIPUP00000017882	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	Cyclin-F; Belongs to the cyclin family.	0.605
CCNE2	ccng1	ENSIPUP00000002713	ENSIPUP00000016577	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	Cyclin-G1; Belongs to the cyclin family.	0.537
CCNE2	ccng2	ENSIPUP00000002713	ENSIPUP00000033091	G1/S-specific cyclin-E2-like; Belongs to the cyclin family.	Cyclin-G2; Belongs to the cyclin family.	0.539