(9 nodes) RNA polymerase II, core complex network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	polr2l	Uncharacterized protein. (67 aa)
	polr2j	RNA_pol_L_2 domain-containing protein. (117 aa)
	polr2h	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	polr2f	Uncharacterized protein. (127 aa)
	polr2b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1187 aa)
	polr2c	RPOLD domain-containing protein. (275 aa)
	polr2d	Polymerase (RNA) II (DNA directed) polypeptide D. (143 aa)
	polr2k	Uncharacterized protein. (58 aa)
	polr2g	S1 domain-containing protein. (172 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
polr2b	polr2c	ENSEEEP00000033517	ENSEEEP00000034478	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RPOLD domain-containing protein.	0.999
polr2b	polr2d	ENSEEEP00000033517	ENSEEEP00000041118	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.999
polr2b	polr2f	ENSEEEP00000033517	ENSEEEP00000032935	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
polr2b	polr2g	ENSEEEP00000033517	ENSEEEP00000046637	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	S1 domain-containing protein.	0.999
polr2b	polr2h	ENSEEEP00000033517	ENSEEEP00000026444	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
polr2b	polr2j	ENSEEEP00000033517	ENSEEEP00000008622	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA_pol_L_2 domain-containing protein.	0.999
polr2b	polr2k	ENSEEEP00000033517	ENSEEEP00000045592	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
polr2b	polr2l	ENSEEEP00000033517	ENSEEEP00000001997	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
polr2c	polr2b	ENSEEEP00000034478	ENSEEEP00000033517	RPOLD domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
polr2c	polr2d	ENSEEEP00000034478	ENSEEEP00000041118	RPOLD domain-containing protein.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.999
polr2c	polr2f	ENSEEEP00000034478	ENSEEEP00000032935	RPOLD domain-containing protein.	Uncharacterized protein.	0.999
polr2c	polr2g	ENSEEEP00000034478	ENSEEEP00000046637	RPOLD domain-containing protein.	S1 domain-containing protein.	0.999
polr2c	polr2h	ENSEEEP00000034478	ENSEEEP00000026444	RPOLD domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
polr2c	polr2j	ENSEEEP00000034478	ENSEEEP00000008622	RPOLD domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.999
polr2c	polr2k	ENSEEEP00000034478	ENSEEEP00000045592	RPOLD domain-containing protein.	Uncharacterized protein.	0.999
polr2c	polr2l	ENSEEEP00000034478	ENSEEEP00000001997	RPOLD domain-containing protein.	Uncharacterized protein.	0.999
polr2d	polr2b	ENSEEEP00000041118	ENSEEEP00000033517	Polymerase (RNA) II (DNA directed) polypeptide D.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
polr2d	polr2c	ENSEEEP00000041118	ENSEEEP00000034478	Polymerase (RNA) II (DNA directed) polypeptide D.	RPOLD domain-containing protein.	0.999
polr2d	polr2f	ENSEEEP00000041118	ENSEEEP00000032935	Polymerase (RNA) II (DNA directed) polypeptide D.	Uncharacterized protein.	0.999
polr2d	polr2g	ENSEEEP00000041118	ENSEEEP00000046637	Polymerase (RNA) II (DNA directed) polypeptide D.	S1 domain-containing protein.	0.999