(12 nodes) RNA polymerase III complex network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	polr3k	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
	polr3b	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1106 aa)
	crcp	RPOL4c domain-containing protein. (167 aa)
	POLR3A	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (802 aa)
	ENSEEEP00000016446	RNA_pol_Rpb1_5 domain-containing protein. (178 aa)
	polr3e	Polymerase (RNA) III (DNA directed) polypeptide E. (691 aa)
	polr3d	Polymerase (RNA) III (DNA directed) polypeptide D. (378 aa)
	polr3c	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (543 aa)
	polr1c	RNA polymerase I and III subunit C. (354 aa)
	POLR2E	Uncharacterized protein. (210 aa)
	polr3f	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (314 aa)
	polr3h	Uncharacterized protein. (212 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000016446	POLR2E	ENSEEEP00000016446	ENSEEEP00000048765	RNA_pol_Rpb1_5 domain-containing protein.	Uncharacterized protein.	0.979
ENSEEEP00000016446	POLR3A	ENSEEEP00000016446	ENSEEEP00000016013	RNA_pol_Rpb1_5 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
ENSEEEP00000016446	crcp	ENSEEEP00000016446	ENSEEEP00000011306	RNA_pol_Rpb1_5 domain-containing protein.	RPOL4c domain-containing protein.	0.968
ENSEEEP00000016446	polr1c	ENSEEEP00000016446	ENSEEEP00000047437	RNA_pol_Rpb1_5 domain-containing protein.	RNA polymerase I and III subunit C.	0.990
ENSEEEP00000016446	polr3b	ENSEEEP00000016446	ENSEEEP00000008336	RNA_pol_Rpb1_5 domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.992
ENSEEEP00000016446	polr3c	ENSEEEP00000016446	ENSEEEP00000026858	RNA_pol_Rpb1_5 domain-containing protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.978
ENSEEEP00000016446	polr3d	ENSEEEP00000016446	ENSEEEP00000025998	RNA_pol_Rpb1_5 domain-containing protein.	Polymerase (RNA) III (DNA directed) polypeptide D.	0.977
ENSEEEP00000016446	polr3e	ENSEEEP00000016446	ENSEEEP00000021418	RNA_pol_Rpb1_5 domain-containing protein.	Polymerase (RNA) III (DNA directed) polypeptide E.	0.974
ENSEEEP00000016446	polr3f	ENSEEEP00000016446	ENSEEEP00000051905	RNA_pol_Rpb1_5 domain-containing protein.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.978
ENSEEEP00000016446	polr3h	ENSEEEP00000016446	ENSEEEP00000052294	RNA_pol_Rpb1_5 domain-containing protein.	Uncharacterized protein.	0.972
ENSEEEP00000016446	polr3k	ENSEEEP00000016446	ENSEEEP00000002017	RNA_pol_Rpb1_5 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.973
POLR2E	ENSEEEP00000016446	ENSEEEP00000048765	ENSEEEP00000016446	Uncharacterized protein.	RNA_pol_Rpb1_5 domain-containing protein.	0.979
POLR2E	POLR3A	ENSEEEP00000048765	ENSEEEP00000016013	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.979
POLR2E	crcp	ENSEEEP00000048765	ENSEEEP00000011306	Uncharacterized protein.	RPOL4c domain-containing protein.	0.997
POLR2E	polr1c	ENSEEEP00000048765	ENSEEEP00000047437	Uncharacterized protein.	RNA polymerase I and III subunit C.	0.999
POLR2E	polr3b	ENSEEEP00000048765	ENSEEEP00000008336	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
POLR2E	polr3c	ENSEEEP00000048765	ENSEEEP00000026858	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
POLR2E	polr3d	ENSEEEP00000048765	ENSEEEP00000025998	Uncharacterized protein.	Polymerase (RNA) III (DNA directed) polypeptide D.	0.997
POLR2E	polr3e	ENSEEEP00000048765	ENSEEEP00000021418	Uncharacterized protein.	Polymerase (RNA) III (DNA directed) polypeptide E.	0.997
POLR2E	polr3f	ENSEEEP00000048765	ENSEEEP00000051905	Uncharacterized protein.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.998