(62 nodes) Classical antibody-mediated complement activation, and Tau and MAP protein, tubulin-binding repeat network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSEEEP00000000297	IGv domain-containing protein. (126 aa)
	ENSEEEP00000000825	Ig-like domain-containing protein. (118 aa)
	ENSEEEP00000001227	Ig-like domain-containing protein. (112 aa)
	ENSEEEP00000004987	Ig-like domain-containing protein. (129 aa)
	ENSEEEP00000004992	Ig-like domain-containing protein. (115 aa)
	ENSEEEP00000005338	Ig-like domain-containing protein. (148 aa)
	ENSEEEP00000005578	Ig-like domain-containing protein. (105 aa)
	ENSEEEP00000005620	Uncharacterized protein. (264 aa)
	ENSEEEP00000005724	Ig-like domain-containing protein. (109 aa)
	ENSEEEP00000005776	Ig-like domain-containing protein. (96 aa)
	ENSEEEP00000005868	Uncharacterized protein. (269 aa)
	ENSEEEP00000005892	Uncharacterized protein. (242 aa)
	ENSEEEP00000006035	Ig-like domain-containing protein. (123 aa)
	ENSEEEP00000006068	Ig-like domain-containing protein. (164 aa)
	ENSEEEP00000006121	Ig-like domain-containing protein. (110 aa)
	ENSEEEP00000006540	Uncharacterized protein. (56 aa)
	ENSEEEP00000006545	Ig-like domain-containing protein. (111 aa)
	pou2af1	Uncharacterized protein. (257 aa)
	ENSEEEP00000008176	Ig-like domain-containing protein. (118 aa)
	ENSEEEP00000008179	Ig-like domain-containing protein. (132 aa)
	ENSEEEP00000008186	Immunoglobulin heavy variable 8-3. (134 aa)
	ENSEEEP00000008196	Ig-like domain-containing protein. (124 aa)
	ENSEEEP00000008199	Immunoglobulin heavy variable 4-7. (125 aa)
	ENSEEEP00000010134	Ig-like domain-containing protein. (123 aa)
	ENSEEEP00000011362	Uncharacterized protein. (255 aa)
	LOC113567884	Uncharacterized protein. (212 aa)
	ENSEEEP00000012545	Ig-like domain-containing protein. (125 aa)
	ENSEEEP00000014372	Ig-like domain-containing protein. (124 aa)
	ENSEEEP00000014410	Microtubule-associated protein. (218 aa)
	ENSEEEP00000015117	IGv domain-containing protein. (230 aa)
	ENSEEEP00000015136	Ig-like domain-containing protein. (107 aa)
	ENSEEEP00000015142	Ig-like domain-containing protein. (120 aa)
	ENSEEEP00000015143	Ig-like domain-containing protein. (115 aa)
	ENSEEEP00000015156	Ig-like domain-containing protein. (112 aa)
	ENSEEEP00000015163	Ig-like domain-containing protein. (118 aa)
	ENSEEEP00000015328	Ig-like domain-containing protein. (135 aa)
	ENSEEEP00000015703	Ig-like domain-containing protein. (120 aa)
	ENSEEEP00000015705	Ig-like domain-containing protein. (118 aa)
	ENSEEEP00000016666	Ig-like domain-containing protein. (135 aa)
	ENSEEEP00000016865	Ig-like domain-containing protein. (118 aa)
	ENSEEEP00000016867	IGv domain-containing protein. (92 aa)
	ENSEEEP00000016870	Ig-like domain-containing protein. (114 aa)
	ENSEEEP00000016874	Ig-like domain-containing protein. (130 aa)
	ENSEEEP00000016885	Ig-like domain-containing protein. (116 aa)
	ENSEEEP00000016896	IGv domain-containing protein. (129 aa)
	ENSEEEP00000018459	Ig-like domain-containing protein. (120 aa)
	ENSEEEP00000019922	Ig-like domain-containing protein. (167 aa)
	ENSEEEP00000019927	Ig-like domain-containing protein. (131 aa)
	ENSEEEP00000023936	Uncharacterized protein. (238 aa)
	cd79b	Ig-like domain-containing protein. (206 aa)
	ENSEEEP00000027867	Microtubule-associated protein. (301 aa)
	ENSEEEP00000029114	Ig-like domain-containing protein. (125 aa)
	ENSEEEP00000029115	Ig-like domain-containing protein. (118 aa)
	ENSEEEP00000029117	Ig-like domain-containing protein. (108 aa)
	ENSEEEP00000029119	Ig-like domain-containing protein. (121 aa)
	ENSEEEP00000029120	Ig-like domain-containing protein. (117 aa)
	ENSEEEP00000038401	Microtubule-associated protein 2. (283 aa)
	ENSEEEP00000038405	Microtubule-associated protein. (286 aa)
	cd79a	IGv domain-containing protein. (227 aa)
	ENSEEEP00000046422	Ig-like domain-containing protein. (132 aa)
	ENSEEEP00000050112	Ig-like domain-containing protein. (102 aa)
	ENSEEEP00000050863	Ig-like domain-containing protein. (123 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000000297	ENSEEEP00000006068	ENSEEEP00000000297	ENSEEEP00000006068	IGv domain-containing protein.	Ig-like domain-containing protein.	0.409
ENSEEEP00000000297	ENSEEEP00000008176	ENSEEEP00000000297	ENSEEEP00000008176	IGv domain-containing protein.	Ig-like domain-containing protein.	0.514
ENSEEEP00000000297	ENSEEEP00000008179	ENSEEEP00000000297	ENSEEEP00000008179	IGv domain-containing protein.	Ig-like domain-containing protein.	0.417
ENSEEEP00000000297	ENSEEEP00000008199	ENSEEEP00000000297	ENSEEEP00000008199	IGv domain-containing protein.	Immunoglobulin heavy variable 4-7.	0.416
ENSEEEP00000000297	ENSEEEP00000011362	ENSEEEP00000000297	ENSEEEP00000011362	IGv domain-containing protein.	Uncharacterized protein.	0.402
ENSEEEP00000000297	ENSEEEP00000015117	ENSEEEP00000000297	ENSEEEP00000015117	IGv domain-containing protein.	IGv domain-containing protein.	0.469
ENSEEEP00000000297	ENSEEEP00000015163	ENSEEEP00000000297	ENSEEEP00000015163	IGv domain-containing protein.	Ig-like domain-containing protein.	0.469
ENSEEEP00000000297	ENSEEEP00000016865	ENSEEEP00000000297	ENSEEEP00000016865	IGv domain-containing protein.	Ig-like domain-containing protein.	0.446
ENSEEEP00000000297	cd79a	ENSEEEP00000000297	ENSEEEP00000043173	IGv domain-containing protein.	IGv domain-containing protein.	0.408
ENSEEEP00000000297	cd79b	ENSEEEP00000000297	ENSEEEP00000026754	IGv domain-containing protein.	Ig-like domain-containing protein.	0.418
ENSEEEP00000000825	ENSEEEP00000011362	ENSEEEP00000000825	ENSEEEP00000011362	Ig-like domain-containing protein.	Uncharacterized protein.	0.402
ENSEEEP00000000825	cd79a	ENSEEEP00000000825	ENSEEEP00000043173	Ig-like domain-containing protein.	IGv domain-containing protein.	0.408
ENSEEEP00000000825	cd79b	ENSEEEP00000000825	ENSEEEP00000026754	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.418
ENSEEEP00000001227	ENSEEEP00000006121	ENSEEEP00000001227	ENSEEEP00000006121	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.431
ENSEEEP00000001227	ENSEEEP00000008176	ENSEEEP00000001227	ENSEEEP00000008176	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.425
ENSEEEP00000001227	ENSEEEP00000008199	ENSEEEP00000001227	ENSEEEP00000008199	Ig-like domain-containing protein.	Immunoglobulin heavy variable 4-7.	0.411
ENSEEEP00000001227	ENSEEEP00000011362	ENSEEEP00000001227	ENSEEEP00000011362	Ig-like domain-containing protein.	Uncharacterized protein.	0.402
ENSEEEP00000001227	ENSEEEP00000016865	ENSEEEP00000001227	ENSEEEP00000016865	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.406
ENSEEEP00000001227	ENSEEEP00000029120	ENSEEEP00000001227	ENSEEEP00000029120	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.412
ENSEEEP00000001227	cd79a	ENSEEEP00000001227	ENSEEEP00000043173	Ig-like domain-containing protein.	IGv domain-containing protein.	0.408