(75 nodes) Mixed, incl. Fatty acid binding, and Plasma lipoprotein remodeling network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSEEEP00000000655	Uncharacterized protein. (128 aa)
	LOC113578146	Acyl-CoA synthetase long chain family member 2. (665 aa)
	LOC113569847	Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex. (110 aa)
	c8b	MACPF domain-containing protein. (587 aa)
	C8A	MACPF domain-containing protein. (595 aa)
	ENSEEEP00000002078	Si:ch211-188c16.1. (477 aa)
	ENSEEEP00000002721	Uncharacterized protein. (284 aa)
	LOC113590495	Uncharacterized protein. (261 aa)
	ENSEEEP00000005158	Uncharacterized protein. (535 aa)
	LOC113569007	Uncharacterized protein. (478 aa)
	ENSEEEP00000005933	Uncharacterized protein. (343 aa)
	ENSEEEP00000007399	Uncharacterized protein. (134 aa)
	LOC113583876	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (134 aa)
	apof	Uncharacterized protein. (416 aa)
	LOC113578327	Uncharacterized protein. (258 aa)
	LOC113586101	Vitellogenin domain-containing protein. (1493 aa)
	ENSEEEP00000012997	Uncharacterized protein. (154 aa)
	LOC113568398	Uncharacterized protein. (255 aa)
	LOC113568397	Uncharacterized protein. (279 aa)
	apoc1	Uncharacterized protein. (86 aa)
	ENSEEEP00000013033	Apolipoprotein C-IV. (83 aa)
	apoe	Uncharacterized protein. (273 aa)
	ENSEEEP00000013227	Uncharacterized protein. (197 aa)
	LOC113578345	Uncharacterized protein. (234 aa)
	LOC113580429	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (204 aa)
	ENSEEEP00000013486	Si:ch211-255i3.4. (73 aa)
	c7	Complement component 7b. (823 aa)
	c6	Complement component 6. (932 aa)
	LOC113571024	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (133 aa)
	stab1	Stabilin 1. (2506 aa)
	ENSEEEP00000016679	Uncharacterized protein. (176 aa)
	ENSEEEP00000016707	Uncharacterized protein. (498 aa)
	LOC113568540	Heme-binding protein soul3. (253 aa)
	LOC113586104	Vitellogenin domain-containing protein. (1311 aa)
	LOC113568597	Uncharacterized protein. (440 aa)
	LOC113586100	DUF1944 domain-containing protein. (234 aa)
	LOC113590160	Uncharacterized protein. (128 aa)
	LOC113570568	Apolipoprotein Bb, tandem duplicate 1. (3711 aa)
	scarf1	Scavenger receptor class F, member 1. (814 aa)
	LOC113580033	FABP domain-containing protein. (126 aa)
	fabp1	FABP domain-containing protein. (131 aa)
	LOC113590596	Uncharacterized protein. (190 aa)
	ENSEEEP00000022863	Uncharacterized protein. (181 aa)
	FAM237A	Family with sequence similarity 237 member A. (144 aa)
	gucd1	Uncharacterized protein. (226 aa)
	LOC113574840	Uncharacterized protein. (376 aa)
	LOC113592285	Uncharacterized protein. (526 aa)
	ppard	Uncharacterized protein. (410 aa)
	LOC113571074	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (132 aa)
	LOC113570677	Fatty acid binding protein 11b; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (142 aa)
	LOC113586460	Uncharacterized protein. (475 aa)
	ENSEEEP00000029216	Uncharacterized protein. (74 aa)
	LOC113589553	Apolipoprotein C-II. (118 aa)
	LOC113577262	BPI fold containing family C, like. (495 aa)
	LOC113575087	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (136 aa)
	apob	Apolipoprotein Ba. (4369 aa)
	LOC113589046	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (196 aa)
	c8g	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (219 aa)
	clu	Clusterin; Belongs to the clusterin family. (442 aa)
	Pkib	Uncharacterized protein. (76 aa)
	FABP2	FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (133 aa)
	Mttp	Uncharacterized protein. (195 aa)
	LOC113575646	Uncharacterized protein. (355 aa)
	LOC113586351	SPARC-like 1. (534 aa)
	LOC113589139	Uncharacterized protein. (248 aa)
	LOC113587510	Complement component 7a. (804 aa)
	c9	Complement component 9. (633 aa)
	ENSEEEP00000039438	Secreted phosphoprotein 1. (278 aa)
	ENSEEEP00000041503	Uncharacterized protein. (131 aa)
	LOC113591431	Dickkopf_N domain-containing protein. (215 aa)
	fabp6	Uncharacterized protein. (143 aa)
	scarb1	Scavenger receptor class B, member 1; Belongs to the CD36 family. (486 aa)
	ENSEEEP00000044651	Uncharacterized protein. (538 aa)
	LOC113581916	Vitellogenin 3, phosvitinless. (1239 aa)
	cetp	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family. (499 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C8A	LOC113587510	ENSEEEP00000002049	ENSEEEP00000037962	MACPF domain-containing protein.	Complement component 7a.	0.604
C8A	c6	ENSEEEP00000002049	ENSEEEP00000014883	MACPF domain-containing protein.	Complement component 6.	0.617
C8A	c7	ENSEEEP00000002049	ENSEEEP00000013883	MACPF domain-containing protein.	Complement component 7b.	0.540
C8A	c8b	ENSEEEP00000002049	ENSEEEP00000002028	MACPF domain-containing protein.	MACPF domain-containing protein.	0.782
C8A	c8g	ENSEEEP00000002049	ENSEEEP00000035160	MACPF domain-containing protein.	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.983
C8A	c9	ENSEEEP00000002049	ENSEEEP00000039234	MACPF domain-containing protein.	Complement component 9.	0.972
ENSEEEP00000000655	LOC113568398	ENSEEEP00000000655	ENSEEEP00000013028	Uncharacterized protein.	Uncharacterized protein.	0.458
ENSEEEP00000000655	LOC113570568	ENSEEEP00000000655	ENSEEEP00000018613	Uncharacterized protein.	Apolipoprotein Bb, tandem duplicate 1.	0.882
ENSEEEP00000000655	LOC113578327	ENSEEEP00000000655	ENSEEEP00000010330	Uncharacterized protein.	Uncharacterized protein.	0.458
ENSEEEP00000000655	LOC113581916	ENSEEEP00000000655	ENSEEEP00000047123	Uncharacterized protein.	Vitellogenin 3, phosvitinless.	0.755
ENSEEEP00000000655	LOC113586100	ENSEEEP00000000655	ENSEEEP00000017777	Uncharacterized protein.	DUF1944 domain-containing protein.	0.755
ENSEEEP00000000655	LOC113586101	ENSEEEP00000000655	ENSEEEP00000012933	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.755
ENSEEEP00000000655	LOC113586104	ENSEEEP00000000655	ENSEEEP00000017469	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.755
ENSEEEP00000000655	apob	ENSEEEP00000000655	ENSEEEP00000033460	Uncharacterized protein.	Apolipoprotein Ba.	0.895
ENSEEEP00000000655	apoe	ENSEEEP00000000655	ENSEEEP00000013154	Uncharacterized protein.	Uncharacterized protein.	0.434
ENSEEEP00000000655	fabp1	ENSEEEP00000000655	ENSEEEP00000020328	Uncharacterized protein.	FABP domain-containing protein.	0.405
ENSEEEP00000002078	ENSEEEP00000002721	ENSEEEP00000002078	ENSEEEP00000002721	Si:ch211-188c16.1.	Uncharacterized protein.	0.462
ENSEEEP00000002078	ENSEEEP00000007399	ENSEEEP00000002078	ENSEEEP00000007399	Si:ch211-188c16.1.	Uncharacterized protein.	0.451
ENSEEEP00000002078	ENSEEEP00000012997	ENSEEEP00000002078	ENSEEEP00000012997	Si:ch211-188c16.1.	Uncharacterized protein.	0.451
ENSEEEP00000002078	LOC113574840	ENSEEEP00000002078	ENSEEEP00000023921	Si:ch211-188c16.1.	Uncharacterized protein.	0.551