STRINGSTRING
LOC113567594 LOC113567594 LOC113567536 LOC113567536 nsmce2 nsmce2 tprkb tprkb xrcc1 xrcc1 LOC113589524 LOC113589524 smc5 smc5 ercc4 ercc4 LOC113582267 LOC113582267 rad51 rad51 xrcc3 xrcc3 rad50 rad50 rad51d rad51d ENSEEEP00000007003 ENSEEEP00000007003 ENSEEEP00000006834 ENSEEEP00000006834 LOC113569058 LOC113569058 LOC113568250 LOC113568250 ercc1 ercc1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC113567594Si:dkey-119f1.1. (1009 aa)
LOC113567536Uncharacterized protein. (1086 aa)
nsmce2NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (257 aa)
tprkbUncharacterized protein; Belongs to the CGI121/TPRKB family. (174 aa)
xrcc1X-ray repair complementing defective repair in Chinese hamster cells 1. (539 aa)
LOC113589524RECA_2 domain-containing protein. (121 aa)
smc5Structural maintenance of chromosomes 5. (1083 aa)
ercc4ERCC4 domain-containing protein. (899 aa)
LOC113582267Breast cancer 2, early onset. (2391 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
xrcc3RECA_2 domain-containing protein. (355 aa)
rad50RAD50 homolog, double strand break repair protein. (1181 aa)
rad51dRECA_2 domain-containing protein. (338 aa)
ENSEEEP00000007003AAA_23 domain-containing protein. (53 aa)
ENSEEEP00000006834Uncharacterized protein. (110 aa)
LOC113569058AAA_23 domain-containing protein. (469 aa)
LOC113568250RAD51 paralog C. (260 aa)
ercc1Uncharacterized protein. (346 aa)
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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