18 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113567594	Si:dkey-119f1.1. (1009 aa)
	LOC113567536	Uncharacterized protein. (1086 aa)
	nsmce2	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (257 aa)
	tprkb	Uncharacterized protein; Belongs to the CGI121/TPRKB family. (174 aa)
	xrcc1	X-ray repair complementing defective repair in Chinese hamster cells 1. (539 aa)
	LOC113589524	RECA_2 domain-containing protein. (121 aa)
	smc5	Structural maintenance of chromosomes 5. (1083 aa)
	ercc4	ERCC4 domain-containing protein. (899 aa)
	LOC113582267	Breast cancer 2, early onset. (2391 aa)
	rad51	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
	xrcc3	RECA_2 domain-containing protein. (355 aa)
	rad50	RAD50 homolog, double strand break repair protein. (1181 aa)
	rad51d	RECA_2 domain-containing protein. (338 aa)
	ENSEEEP00000007003	AAA_23 domain-containing protein. (53 aa)
	ENSEEEP00000006834	Uncharacterized protein. (110 aa)
	LOC113569058	AAA_23 domain-containing protein. (469 aa)
	LOC113568250	RAD51 paralog C. (260 aa)
	ercc1	Uncharacterized protein. (346 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000006834	LOC113582267	ENSEEEP00000006834	ENSEEEP00000018632	Uncharacterized protein.	Breast cancer 2, early onset.	0.449
ENSEEEP00000006834	ercc4	ENSEEEP00000006834	ENSEEEP00000020903	Uncharacterized protein.	ERCC4 domain-containing protein.	0.973
ENSEEEP00000006834	rad51	ENSEEEP00000006834	ENSEEEP00000017370	Uncharacterized protein.	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.638
ENSEEEP00000006834	rad51d	ENSEEEP00000006834	ENSEEEP00000008581	Uncharacterized protein.	RECA_2 domain-containing protein.	0.424
ENSEEEP00000006834	xrcc1	ENSEEEP00000006834	ENSEEEP00000030211	Uncharacterized protein.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.508
ENSEEEP00000006834	xrcc3	ENSEEEP00000006834	ENSEEEP00000016330	Uncharacterized protein.	RECA_2 domain-containing protein.	0.507
ENSEEEP00000007003	LOC113568250	ENSEEEP00000007003	ENSEEEP00000004244	AAA_23 domain-containing protein.	RAD51 paralog C.	0.671
ENSEEEP00000007003	LOC113582267	ENSEEEP00000007003	ENSEEEP00000018632	AAA_23 domain-containing protein.	Breast cancer 2, early onset.	0.536
ENSEEEP00000007003	LOC113589524	ENSEEEP00000007003	ENSEEEP00000028964	AAA_23 domain-containing protein.	RECA_2 domain-containing protein.	0.671
ENSEEEP00000007003	ercc4	ENSEEEP00000007003	ENSEEEP00000020903	AAA_23 domain-containing protein.	ERCC4 domain-containing protein.	0.470
ENSEEEP00000007003	rad51	ENSEEEP00000007003	ENSEEEP00000017370	AAA_23 domain-containing protein.	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.825
ENSEEEP00000007003	rad51d	ENSEEEP00000007003	ENSEEEP00000008581	AAA_23 domain-containing protein.	RECA_2 domain-containing protein.	0.751
ENSEEEP00000007003	smc5	ENSEEEP00000007003	ENSEEEP00000023984	AAA_23 domain-containing protein.	Structural maintenance of chromosomes 5.	0.467
ENSEEEP00000007003	xrcc1	ENSEEEP00000007003	ENSEEEP00000030211	AAA_23 domain-containing protein.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.633
ENSEEEP00000007003	xrcc3	ENSEEEP00000007003	ENSEEEP00000016330	AAA_23 domain-containing protein.	RECA_2 domain-containing protein.	0.713
LOC113567536	nsmce2	ENSEEEP00000035482	ENSEEEP00000033665	Uncharacterized protein.	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	0.972
LOC113567536	rad51	ENSEEEP00000035482	ENSEEEP00000017370	Uncharacterized protein.	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.714
LOC113567536	rad51d	ENSEEEP00000035482	ENSEEEP00000008581	Uncharacterized protein.	RECA_2 domain-containing protein.	0.603
LOC113567536	smc5	ENSEEEP00000035482	ENSEEEP00000023984	Uncharacterized protein.	Structural maintenance of chromosomes 5.	0.978
LOC113567594	nsmce2	ENSEEEP00000037992	ENSEEEP00000033665	Si:dkey-119f1.1.	NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.	0.972