STRINGSTRING
arid4a arid4a polr2d polr2d LOC113571271 LOC113571271 LOC113571834 LOC113571834 gtf2e1 gtf2e1 abra abra LOC113575218 LOC113575218 LOC113575229 LOC113575229 ELOF1 ELOF1 wdr61 wdr61 gtf2h1 gtf2h1 gtf2a2 gtf2a2 SRF SRF Srf Srf LOC113581134 LOC113581134 gtf2h2c gtf2h2c ENSEEEP00000036171 ENSEEEP00000036171 ENSEEEP00000036168 ENSEEEP00000036168 rpap1 rpap1 ccdc124 ccdc124 LOC113587965 LOC113587965 drap1 drap1 polr2a polr2a polr2c polr2c ENSEEEP00000034128 ENSEEEP00000034128 eny2 eny2 ENSEEEP00000033543 ENSEEEP00000033543 polr2b polr2b gcm2 gcm2 polr2f polr2f gsx1 gsx1 ENSEEEP00000032423 ENSEEEP00000032423 LOC113571196 LOC113571196 taf3 taf3 elf3 elf3 polr2i polr2i ENSEEEP00000031728 ENSEEEP00000031728 ell2 ell2 ctr9 ctr9 LOC113578156 LOC113578156 cdk13 cdk13 taf13 taf13 gtf2f1 gtf2f1 ENSEEEP00000015861 ENSEEEP00000015861 LOC113567946 LOC113567946 xbp1 xbp1 gtf2e2 gtf2e2 ENSEEEP00000017640 ENSEEEP00000017640 gtf2h4 gtf2h4 ENSEEEP00000017688 ENSEEEP00000017688 LOC113575993 LOC113575993 eloa eloa atrx atrx cdc73 cdc73 smad4 smad4 supt3h supt3h ENSEEEP00000020550 ENSEEEP00000020550 gtf2a1 gtf2a1 prdm4 prdm4 LOC113572375 LOC113572375 taf11 taf11 ercc3 ercc3 LOC113588784 LOC113588784 plac8 plac8 LOC113588808 LOC113588808 supt16h supt16h ice2 ice2 paf1 paf1 LOC113569548 LOC113569548 ENSEEEP00000001488 ENSEEEP00000001488 LOC113591007 LOC113591007 ENSEEEP00000001700 ENSEEEP00000001700 LOC113578173 LOC113578173 polr2l polr2l ENSEEEP00000002053 ENSEEEP00000002053 ENSEEEP00000002117 ENSEEEP00000002117 etv1 etv1 ENSEEEP00000004026 ENSEEEP00000004026 LOC113584288 LOC113584288 dr1 dr1 taf8 taf8 ENSEEEP00000004651 ENSEEEP00000004651 LOC113574230 LOC113574230 tbp tbp LOC113580162 LOC113580162 Tcea2 Tcea2 LOC113580833 LOC113580833 taf10 taf10 ENSEEEP00000028691 ENSEEEP00000028691 gtf2h5 gtf2h5 snapc4 snapc4 LOC113588922 LOC113588922 gtf2f2 gtf2f2 SETD2 SETD2 Nfatc4 Nfatc4 nkx2-5 nkx2-5 ENSEEEP00000026620 ENSEEEP00000026620 polr2h polr2h ell ell zbtb1 zbtb1 LOC113582376 LOC113582376 ENSEEEP00000025096 ENSEEEP00000025096 pcid2 pcid2 Ice1 Ice1 LOC113591707 LOC113591707 taf2 taf2 snapc1 snapc1 LOC113589483 LOC113589483 LOC113583897 LOC113583897 supt6h supt6h ENSEEEP00000011251 ENSEEEP00000011251 LOC113577105 LOC113577105 LOC113592136 LOC113592136 LOC113585673 LOC113585673 ENSEEEP00000012815 ENSEEEP00000012815 LOC113572575 LOC113572575 taf12 taf12 LOC113572193 LOC113572193 ddx21 ddx21 nr1h4 nr1h4 LOC113587184 LOC113587184 ENSEEEP00000005842 ENSEEEP00000005842 nkx2-3 nkx2-3 LOC113569258 LOC113569258 LOC113575852 LOC113575852 snapc5 snapc5 LOC113570819 LOC113570819 pcf11 pcf11 tbpl2 tbpl2 ENSEEEP00000008316 ENSEEEP00000008316 rb1 rb1 polr2j polr2j ENSEEEP00000008667 ENSEEEP00000008667 ENSEEEP00000009327 ENSEEEP00000009327 gtf2a1l gtf2a1l tbpl1 tbpl1 LOC113568463 LOC113568463 taf6 taf6 leo1 leo1 LOC113583124 LOC113583124 ercc2 ercc2 supt5h supt5h rbmx rbmx LOC113576382 LOC113576382 ENSEEEP00000050891 ENSEEEP00000050891 sqstm1 sqstm1 nfatc2 nfatc2 bcl9 bcl9 gtf2h3 gtf2h3 mnat1 mnat1 phrf1 phrf1 POLR2E POLR2E rtf1 rtf1 nmi nmi LOC113576879 LOC113576879 med1 med1 LOC113577365 LOC113577365 tmem240 tmem240 ssu72 ssu72 ENSEEEP00000046889 ENSEEEP00000046889 polr2g polr2g ENSEEEP00000046546 ENSEEEP00000046546 ccnh ccnh taf7 taf7 snapc3 snapc3 polr2k polr2k LOC113588776 LOC113588776 NKX2-8 NKX2-8 gtf2b gtf2b LOC113575300 LOC113575300 LOC113571278 LOC113571278 med18 med18 msx1 msx1 CYTL1 CYTL1 taf6l taf6l atxn1l atxn1l nfil3 nfil3 ENSEEEP00000041845 ENSEEEP00000041845 LOC113574075 LOC113574075
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
arid4aAT rich interactive domain 4A (RBP1-like). (1247 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (143 aa)
LOC113571271Uncharacterized protein. (659 aa)
LOC113571834Nuclear factor of activated T cells 5a. (1453 aa)
gtf2e1HTH TFE/IIEalpha-type domain-containing protein. (448 aa)
abraActin binding Rho activating protein b. (358 aa)
LOC113575218BZIP domain-containing protein. (576 aa)
LOC113575229BZIP domain-containing protein. (400 aa)
ELOF1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
wdr61WD_REPEATS_REGION domain-containing protein. (305 aa)
gtf2h1Uncharacterized protein. (607 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
SRFSerum response factor. (369 aa)
SrfUncharacterized protein. (185 aa)
LOC113581134Cyclin-dependent kinase 12. (1189 aa)
gtf2h2cGeneral transcription factor IIH subunit. (398 aa)
ENSEEEP00000036171Si:ch211-13k12.2. (417 aa)
ENSEEEP00000036168ELL domain-containing protein. (105 aa)
rpap1RNA polymerase II associated protein 1. (1394 aa)
ccdc124HMG box domain-containing protein. (214 aa)
LOC113587965Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family. (530 aa)
drap1CBFD_NFYB_HMF domain-containing protein. (227 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
polr2cRPOLD domain-containing protein. (275 aa)
ENSEEEP00000034128Uncharacterized protein. (221 aa)
eny2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (98 aa)
ENSEEEP00000033543SR-related CTD-associated factor 1. (702 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1187 aa)
gcm2GCM domain-containing protein. (496 aa)
polr2fUncharacterized protein. (127 aa)
gsx1GS homeobox 1. (230 aa)
ENSEEEP00000032423Thioredoxin_11 domain-containing protein. (500 aa)
LOC113571196Mothers against decapentaplegic homolog. (572 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (774 aa)
elf3Uncharacterized protein. (378 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
ENSEEEP00000031728Uncharacterized protein. (384 aa)
ell2Elongation factor, RNA polymerase II, 2. (592 aa)
ctr9TPR_REGION domain-containing protein. (1159 aa)
LOC113578156RHD domain-containing protein. (1235 aa)
cdk13Cyclin-dependent kinase 13. (1240 aa)
taf13Uncharacterized protein. (124 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (535 aa)
ENSEEEP00000015861Uncharacterized protein. (107 aa)
LOC113567946Mothers against decapentaplegic homolog. (524 aa)
xbp1BZIP domain-containing protein. (262 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (318 aa)
ENSEEEP00000017640Thioredoxin_11 domain-containing protein. (561 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (473 aa)
ENSEEEP00000017688AIG1-type G domain-containing protein. (347 aa)
LOC113575993Uncharacterized protein. (435 aa)
eloaUncharacterized protein. (623 aa)
atrxUncharacterized protein. (1986 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (401 aa)
smad4Mothers against decapentaplegic homolog. (545 aa)
supt3hUncharacterized protein. (375 aa)
ENSEEEP00000020550Transcription elongation factor A (SII), 1. (86 aa)
gtf2a1Uncharacterized protein. (386 aa)
prdm4PR domain containing 4. (791 aa)
LOC113572375Uncharacterized protein. (415 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (207 aa)
ercc3Uncharacterized protein. (823 aa)
LOC113588784BZIP domain-containing protein. (590 aa)
plac8Uncharacterized protein. (114 aa)
LOC113588808Uncharacterized protein. (400 aa)
supt16hUncharacterized protein. (1064 aa)
ice2Interactor of little elongator complex ELL subunit 2. (847 aa)
paf1Uncharacterized protein. (513 aa)
LOC113569548TFIIS central domain-containing protein. (153 aa)
ENSEEEP00000001488Mothers against decapentaplegic homolog. (440 aa)
LOC113591007CCAAT/enhancer-binding protein. (283 aa)
ENSEEEP00000001700Uncharacterized protein. (248 aa)
LOC113578173Homeobox domain-containing protein. (298 aa)
polr2lUncharacterized protein. (67 aa)
ENSEEEP00000002053TAF4 domain-containing protein. (282 aa)
ENSEEEP00000002117Endothelin 1. (99 aa)
etv1Ets variant 1. (471 aa)
ENSEEEP00000004026Uncharacterized protein. (394 aa)
LOC113584288TAFH domain-containing protein. (877 aa)
dr1CBFD_NFYB_HMF domain-containing protein. (183 aa)
taf8BTP domain-containing protein. (307 aa)
ENSEEEP00000004651G domain-containing protein. (216 aa)
LOC113574230Actin binding Rho activating protein a. (315 aa)
tbpUncharacterized protein. (297 aa)
LOC113580162Uncharacterized protein. (175 aa)
Tcea2Transcription elongation factor A (SII), 2. (306 aa)
LOC113580833Ubiquitin-like domain-containing protein. (119 aa)
taf10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (191 aa)
ENSEEEP00000028691Uncharacterized protein. (61 aa)
gtf2h5Uncharacterized protein. (71 aa)
snapc4Small nuclear RNA activating complex, polypeptide 4. (1564 aa)
LOC113588922E1A binding protein p300 b. (1825 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (265 aa)
SETD2SET domain containing 2, histone lysine methyltransferase. (2402 aa)
Nfatc4RHD domain-containing protein. (165 aa)
nkx2-5Homeobox domain-containing protein. (313 aa)
ENSEEEP00000026620Uncharacterized protein. (236 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ellElongation factor RNA polymerase II. (526 aa)
zbtb1Uncharacterized protein. (680 aa)
LOC113582376BZIP domain-containing protein. (261 aa)
ENSEEEP00000025096NR LBD domain-containing protein. (205 aa)
pcid2PCI domain-containing protein. (406 aa)
Ice1Uncharacterized protein. (922 aa)
LOC113591707Protein S100; Belongs to the S-100 family. (98 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1155 aa)
snapc1Small nuclear RNA activating complex, polypeptide 1b. (367 aa)
LOC113589483Ets homologous factor. (271 aa)
LOC113583897Uncharacterized protein. (457 aa)
supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1731 aa)
ENSEEEP00000011251Nuclear receptor domain-containing protein. (558 aa)
LOC113577105General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (253 aa)
LOC113592136TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1705 aa)
LOC113585673TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (517 aa)
ENSEEEP00000012815annotation not available (105 aa)
LOC113572575Protein S100; Belongs to the S-100 family. (101 aa)
taf12TFIID_20kDa domain-containing protein. (162 aa)
LOC113572193Uncharacterized protein. (663 aa)
ddx21Uncharacterized protein. (759 aa)
nr1h4Uncharacterized protein. (461 aa)
LOC113587184Actin binding LIM protein family, member 3. (644 aa)
ENSEEEP00000005842Thioredoxin_11 domain-containing protein. (523 aa)
nkx2-3Homeobox domain-containing protein. (323 aa)
LOC113569258General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
LOC113575852Uncharacterized protein. (426 aa)
snapc5Uncharacterized protein. (111 aa)
LOC113570819Uncharacterized protein. (405 aa)
pcf11PCF11, cleavage and polyadenylation factor subunit. (1483 aa)
tbpl2Uncharacterized protein. (311 aa)
ENSEEEP00000008316ELL domain-containing protein. (66 aa)
rb1Retinoblastoma 1. (901 aa)
polr2jRNA_pol_L_2 domain-containing protein. (117 aa)
ENSEEEP00000008667GTF2I repeat domain containing 1. (816 aa)
ENSEEEP00000009327Helicase-like transcription factor. (610 aa)
gtf2a1lGeneral transcription factor IIA, 1-like. (347 aa)
tbpl1Uncharacterized protein. (186 aa)
LOC113568463BHLH domain-containing protein. (133 aa)
taf6TAF domain-containing protein. (652 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (667 aa)
LOC113583124Si:dkey-29b11.3. (81 aa)
ercc2Helicase ATP-binding domain-containing protein. (760 aa)
supt5hTranscription elongation factor SPT5. (1082 aa)
rbmxRRM domain-containing protein. (390 aa)
LOC113576382Homeobox domain-containing protein. (260 aa)
ENSEEEP00000050891Small nuclear RNA activating complex, polypeptide 1a. (336 aa)
sqstm1Uncharacterized protein. (456 aa)
nfatc2Nuclear factor of activated T cells 2a. (849 aa)
bcl9B cell CLL/lymphoma 9. (1494 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (293 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
phrf1PHD and ring finger domains 1. (1607 aa)
POLR2EUncharacterized protein. (210 aa)
rtf1Plus3 domain-containing protein. (678 aa)
nmiUncharacterized protein. (382 aa)
LOC113576879Ubiquitin-like domain-containing protein. (119 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1806 aa)
LOC113577365Uncharacterized protein. (486 aa)
tmem240Transmembrane protein 240b. (155 aa)
ssu72Uncharacterized protein. (194 aa)
ENSEEEP00000046889Uncharacterized protein. (212 aa)
polr2gS1 domain-containing protein. (172 aa)
ENSEEEP00000046546TAF4 domain-containing protein. (277 aa)
ccnhCYCLIN domain-containing protein; Belongs to the cyclin family. (321 aa)
taf7TAFII55_N domain-containing protein. (377 aa)
snapc3Uncharacterized protein. (383 aa)
polr2kUncharacterized protein. (58 aa)
LOC113588776Elongin A, like. (554 aa)
NKX2-8NK2 homeobox 8. (132 aa)
gtf2bTFIIB-type domain-containing protein. (319 aa)
LOC113575300Uncharacterized protein. (410 aa)
LOC113571278Uncharacterized protein. (248 aa)
med18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (208 aa)
msx1Homeobox domain-containing protein. (282 aa)
CYTL1Uncharacterized protein. (146 aa)
taf6lTAF domain-containing protein. (634 aa)
atxn1lAtaxin 1-like. (635 aa)
nfil3BZIP domain-containing protein. (466 aa)
ENSEEEP00000041845Si:dkey-60d5.3. (154 aa)
LOC113574075ETS domain-containing protein. (520 aa)
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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