10 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	COG5	Component of oligomeric golgi complex 5. (736 aa)
	cog2	Uncharacterized protein. (735 aa)
	rnf215	Ring finger protein 215. (231 aa)
	cog7	Uncharacterized protein. (767 aa)
	cog1	Uncharacterized protein. (973 aa)
	cog8	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (619 aa)
	cog4	Cog4 domain-containing protein. (787 aa)
	cog3	Uncharacterized protein. (829 aa)
	cog6	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (657 aa)
	dnajc28	J domain-containing protein. (372 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COG5	cog1	ENSEEEP00000002524	ENSEEEP00000034597	Component of oligomeric golgi complex 5.	Uncharacterized protein.	0.997
COG5	cog2	ENSEEEP00000002524	ENSEEEP00000007479	Component of oligomeric golgi complex 5.	Uncharacterized protein.	0.996
COG5	cog3	ENSEEEP00000002524	ENSEEEP00000039645	Component of oligomeric golgi complex 5.	Uncharacterized protein.	0.996
COG5	cog4	ENSEEEP00000002524	ENSEEEP00000035032	Component of oligomeric golgi complex 5.	Cog4 domain-containing protein.	0.970
COG5	cog6	ENSEEEP00000002524	ENSEEEP00000041582	Component of oligomeric golgi complex 5.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.997
COG5	cog7	ENSEEEP00000002524	ENSEEEP00000023643	Component of oligomeric golgi complex 5.	Uncharacterized protein.	0.997
COG5	cog8	ENSEEEP00000002524	ENSEEEP00000034756	Component of oligomeric golgi complex 5.	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	0.997
cog1	COG5	ENSEEEP00000034597	ENSEEEP00000002524	Uncharacterized protein.	Component of oligomeric golgi complex 5.	0.997
cog1	cog2	ENSEEEP00000034597	ENSEEEP00000007479	Uncharacterized protein.	Uncharacterized protein.	0.996
cog1	cog3	ENSEEEP00000034597	ENSEEEP00000039645	Uncharacterized protein.	Uncharacterized protein.	0.996
cog1	cog4	ENSEEEP00000034597	ENSEEEP00000035032	Uncharacterized protein.	Cog4 domain-containing protein.	0.970
cog1	cog6	ENSEEEP00000034597	ENSEEEP00000041582	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.997
cog1	cog7	ENSEEEP00000034597	ENSEEEP00000023643	Uncharacterized protein.	Uncharacterized protein.	0.997
cog1	cog8	ENSEEEP00000034597	ENSEEEP00000034756	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	0.997
cog2	COG5	ENSEEEP00000007479	ENSEEEP00000002524	Uncharacterized protein.	Component of oligomeric golgi complex 5.	0.996
cog2	cog1	ENSEEEP00000007479	ENSEEEP00000034597	Uncharacterized protein.	Uncharacterized protein.	0.996
cog2	cog3	ENSEEEP00000007479	ENSEEEP00000039645	Uncharacterized protein.	Uncharacterized protein.	0.996
cog2	cog4	ENSEEEP00000007479	ENSEEEP00000035032	Uncharacterized protein.	Cog4 domain-containing protein.	0.976
cog2	cog6	ENSEEEP00000007479	ENSEEEP00000041582	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.996
cog2	cog7	ENSEEEP00000007479	ENSEEEP00000023643	Uncharacterized protein.	Uncharacterized protein.	0.996