(14 nodes) Cytolysis network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSEEEP00000000461	Uncharacterized protein. (126 aa)
	c8b	MACPF domain-containing protein. (587 aa)
	C8A	MACPF domain-containing protein. (595 aa)
	LOC113590058	Uncharacterized protein. (587 aa)
	LOC113573847	Uncharacterized protein; Belongs to the glycosyl hydrolase 22 family. (145 aa)
	c8g	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (219 aa)
	LOC113572487	Lysozyme g. (185 aa)
	c9	Complement component 9. (633 aa)
	LOC113588365	Monocyte to macrophage differentiation-associated 2b. (229 aa)
	mmd	Uncharacterized protein. (233 aa)
	LYZ	Lysozyme; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Belongs to the glycosyl hydrolase 22 family. (142 aa)
	ENSEEEP00000047510	Perforin 1.2. (462 aa)
	mmd2	Monocyte to macrophage differentiation associated 2. (239 aa)
	ninj1	Ninjurin 1. (142 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C8A	c8b	ENSEEEP00000002049	ENSEEEP00000002028	MACPF domain-containing protein.	MACPF domain-containing protein.	0.782
C8A	c8g	ENSEEEP00000002049	ENSEEEP00000035160	MACPF domain-containing protein.	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.983
C8A	c9	ENSEEEP00000002049	ENSEEEP00000039234	MACPF domain-containing protein.	Complement component 9.	0.972
ENSEEEP00000047510	c9	ENSEEEP00000047510	ENSEEEP00000039234	Perforin 1.2.	Complement component 9.	0.528
c8b	C8A	ENSEEEP00000002028	ENSEEEP00000002049	MACPF domain-containing protein.	MACPF domain-containing protein.	0.782
c8b	c8g	ENSEEEP00000002028	ENSEEEP00000035160	MACPF domain-containing protein.	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.784
c8b	c9	ENSEEEP00000002028	ENSEEEP00000039234	MACPF domain-containing protein.	Complement component 9.	0.726
c8g	C8A	ENSEEEP00000035160	ENSEEEP00000002049	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	MACPF domain-containing protein.	0.983
c8g	c8b	ENSEEEP00000035160	ENSEEEP00000002028	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	MACPF domain-containing protein.	0.784
c8g	c9	ENSEEEP00000035160	ENSEEEP00000039234	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Complement component 9.	0.795
c9	C8A	ENSEEEP00000039234	ENSEEEP00000002049	Complement component 9.	MACPF domain-containing protein.	0.972
c9	ENSEEEP00000047510	ENSEEEP00000039234	ENSEEEP00000047510	Complement component 9.	Perforin 1.2.	0.528
c9	c8b	ENSEEEP00000039234	ENSEEEP00000002028	Complement component 9.	MACPF domain-containing protein.	0.726
c9	c8g	ENSEEEP00000039234	ENSEEEP00000035160	Complement component 9.	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.795