38 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cct5	Uncharacterized protein. (541 aa)
	sirt6	Deacetylase sirtuin-type domain-containing protein. (396 aa)
	ino80e	Uncharacterized protein. (386 aa)
	LOC113589886	Poly [ADP-ribose] polymerase. (1168 aa)
	LOC113569058	AAA_23 domain-containing protein. (469 aa)
	ENSEEEP00000006834	Uncharacterized protein. (110 aa)
	ENSEEEP00000007003	AAA_23 domain-containing protein. (53 aa)
	nfrkb	Nuclear factor related to kappaB binding protein. (1268 aa)
	ENSEEEP00000011836	Homeobox containing 1a. (375 aa)
	rad50	RAD50 homolog, double strand break repair protein. (1181 aa)
	nek2	Protein kinase domain-containing protein. (465 aa)
	atrx	Uncharacterized protein. (1986 aa)
	pot1	Protection of telomeres 1 homolog. (767 aa)
	ENSEEEP00000019307	Uncharacterized protein. (258 aa)
	LOC113582318	INO80 complex subunit Da. (652 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1001 aa)
	uchl5	Ubiquitin carboxyl-terminal hydrolase. (345 aa)
	ino80	Uncharacterized protein. (1128 aa)
	ENSEEEP00000032310	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (3024 aa)
	atr	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2627 aa)
	tnks	Poly [ADP-ribose] polymerase. (1274 aa)
	ENSEEEP00000034928	Uncharacterized protein. (435 aa)
	cct3	T-complex protein 1 subunit gamma. (542 aa)
	ppp1r10	Uncharacterized protein. (793 aa)
	TNKS2	Poly [ADP-ribose] polymerase. (1102 aa)
	LOC113577337	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (263 aa)
	ercc1	Uncharacterized protein. (346 aa)
	naf1	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (348 aa)
	map2k7	Mitogen-activated protein kinase kinase 7. (453 aa)
	dkc1	PUA domain-containing protein. (525 aa)
	fbxo4	F-box protein 4. (371 aa)
	cct2	Uncharacterized protein. (535 aa)
	xrcc5	Ku domain-containing protein. (740 aa)
	mapkapk5	Protein kinase domain-containing protein. (471 aa)
	mcrs1	FHA domain-containing protein. (475 aa)
	pnkp	FHA_2 domain-containing protein. (595 aa)
	ENSEEEP00000051173	TCF3 (E2A) fusion partner. (165 aa)
	map3k4	Mitogen-activated protein kinase kinase kinase 4. (1552 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000006834	ENSEEEP00000019307	ENSEEEP00000006834	ENSEEEP00000019307	Uncharacterized protein.	Uncharacterized protein.	0.927
ENSEEEP00000006834	ENSEEEP00000032310	ENSEEEP00000006834	ENSEEEP00000032310	Uncharacterized protein.	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	0.585
ENSEEEP00000006834	LOC113577337	ENSEEEP00000006834	ENSEEEP00000039145	Uncharacterized protein.	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.	0.794
ENSEEEP00000006834	atr	ENSEEEP00000006834	ENSEEEP00000033278	Uncharacterized protein.	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	0.680
ENSEEEP00000006834	xrcc5	ENSEEEP00000006834	ENSEEEP00000044169	Uncharacterized protein.	Ku domain-containing protein.	0.502
ENSEEEP00000007003	ENSEEEP00000019307	ENSEEEP00000007003	ENSEEEP00000019307	AAA_23 domain-containing protein.	Uncharacterized protein.	0.480
ENSEEEP00000007003	ENSEEEP00000032310	ENSEEEP00000007003	ENSEEEP00000032310	AAA_23 domain-containing protein.	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	0.917
ENSEEEP00000007003	atr	ENSEEEP00000007003	ENSEEEP00000033278	AAA_23 domain-containing protein.	ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	0.847
ENSEEEP00000007003	pot1	ENSEEEP00000007003	ENSEEEP00000018754	AAA_23 domain-containing protein.	Protection of telomeres 1 homolog.	0.447
ENSEEEP00000007003	xrcc5	ENSEEEP00000007003	ENSEEEP00000044169	AAA_23 domain-containing protein.	Ku domain-containing protein.	0.726
ENSEEEP00000019307	ENSEEEP00000006834	ENSEEEP00000019307	ENSEEEP00000006834	Uncharacterized protein.	Uncharacterized protein.	0.927
ENSEEEP00000019307	ENSEEEP00000007003	ENSEEEP00000019307	ENSEEEP00000007003	Uncharacterized protein.	AAA_23 domain-containing protein.	0.480
ENSEEEP00000019307	ENSEEEP00000032310	ENSEEEP00000019307	ENSEEEP00000032310	Uncharacterized protein.	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	0.728
ENSEEEP00000019307	LOC113569058	ENSEEEP00000019307	ENSEEEP00000005699	Uncharacterized protein.	AAA_23 domain-containing protein.	0.480
ENSEEEP00000019307	LOC113577337	ENSEEEP00000019307	ENSEEEP00000039145	Uncharacterized protein.	Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.	0.971
ENSEEEP00000019307	ercc1	ENSEEEP00000019307	ENSEEEP00000040762	Uncharacterized protein.	Uncharacterized protein.	0.927
ENSEEEP00000019307	rad50	ENSEEEP00000019307	ENSEEEP00000013894	Uncharacterized protein.	RAD50 homolog, double strand break repair protein.	0.480
ENSEEEP00000032310	ENSEEEP00000006834	ENSEEEP00000032310	ENSEEEP00000006834	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.585
ENSEEEP00000032310	ENSEEEP00000007003	ENSEEEP00000032310	ENSEEEP00000007003	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	AAA_23 domain-containing protein.	0.917
ENSEEEP00000032310	ENSEEEP00000019307	ENSEEEP00000032310	ENSEEEP00000019307	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.728