(25 nodes) Microtubule anchoring network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bccip	Protein BCCIP homolog; Belongs to the BCP1 family. (294 aa)
	fopnl	LisH domain-containing protein. (142 aa)
	bicd2	Bicaudal D homolog 2 (Drosophila). (840 aa)
	bicd1	Bicaudal D homolog 1a. (889 aa)
	BICD2	BICD cargo adaptor 2. (770 aa)
	LOC113578770	Zgc:162200. (853 aa)
	CLASP1	Cytoplasmic linker associated protein 1. (1475 aa)
	LOC113575838	Si:ch211-169p10.1. (623 aa)
	cep57	Centrosomal protein 57. (445 aa)
	LOC113578874	Peptidase S72 domain-containing protein. (845 aa)
	fgfr1op	Uncharacterized protein. (535 aa)
	dag1	Peptidase S72 domain-containing protein. (861 aa)
	clasp1	Cytoplasmic linker associated protein 1a. (1520 aa)
	Cep350	CAP-Gly domain-containing protein. (117 aa)
	ENSEEEP00000027249	Coiled-coil domain containing 120. (480 aa)
	ENSEEEP00000028716	Uncharacterized protein. (65 aa)
	kif3a	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (797 aa)
	clasp2	Cytoplasmic linker associated protein 2. (1289 aa)
	dctn1	CAP-Gly domain-containing protein. (1218 aa)
	ENSEEEP00000037529	Bardet-Biedl syndrome 4. (356 aa)
	LOC113585867	CAP-Gly domain-containing protein. (1235 aa)
	LOC113575788	Uncharacterized protein. (877 aa)
	pex14	Peroxisomal biogenesis factor 14. (338 aa)
	pcm1	Pericentriolar material 1. (1844 aa)
	cep19	Centrosomal protein 19. (212 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BICD2	LOC113585867	ENSEEEP00000003708	ENSEEEP00000039278	BICD cargo adaptor 2.	CAP-Gly domain-containing protein.	0.738
BICD2	dctn1	ENSEEEP00000003708	ENSEEEP00000036973	BICD cargo adaptor 2.	CAP-Gly domain-containing protein.	0.738
Cep350	cep19	ENSEEEP00000025331	ENSEEEP00000051826	CAP-Gly domain-containing protein.	Centrosomal protein 19.	0.702
Cep350	fgfr1op	ENSEEEP00000025331	ENSEEEP00000019886	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.895
Cep350	fopnl	ENSEEEP00000025331	ENSEEEP00000000294	CAP-Gly domain-containing protein.	LisH domain-containing protein.	0.557
ENSEEEP00000037529	LOC113585867	ENSEEEP00000037529	ENSEEEP00000039278	Bardet-Biedl syndrome 4.	CAP-Gly domain-containing protein.	0.496
ENSEEEP00000037529	dctn1	ENSEEEP00000037529	ENSEEEP00000036973	Bardet-Biedl syndrome 4.	CAP-Gly domain-containing protein.	0.496
ENSEEEP00000037529	kif3a	ENSEEEP00000037529	ENSEEEP00000032850	Bardet-Biedl syndrome 4.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.495
ENSEEEP00000037529	pcm1	ENSEEEP00000037529	ENSEEEP00000049082	Bardet-Biedl syndrome 4.	Pericentriolar material 1.	0.876
LOC113575788	LOC113585867	ENSEEEP00000042125	ENSEEEP00000039278	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.738
LOC113575788	dctn1	ENSEEEP00000042125	ENSEEEP00000036973	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.738
LOC113578770	LOC113585867	ENSEEEP00000004340	ENSEEEP00000039278	Zgc:162200.	CAP-Gly domain-containing protein.	0.738
LOC113578770	dctn1	ENSEEEP00000004340	ENSEEEP00000036973	Zgc:162200.	CAP-Gly domain-containing protein.	0.738
LOC113578874	dag1	ENSEEEP00000014542	ENSEEEP00000020941	Peptidase S72 domain-containing protein.	Peptidase S72 domain-containing protein.	0.902
LOC113585867	BICD2	ENSEEEP00000039278	ENSEEEP00000003708	CAP-Gly domain-containing protein.	BICD cargo adaptor 2.	0.738
LOC113585867	ENSEEEP00000037529	ENSEEEP00000039278	ENSEEEP00000037529	CAP-Gly domain-containing protein.	Bardet-Biedl syndrome 4.	0.496
LOC113585867	LOC113575788	ENSEEEP00000039278	ENSEEEP00000042125	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.738
LOC113585867	LOC113578770	ENSEEEP00000039278	ENSEEEP00000004340	CAP-Gly domain-containing protein.	Zgc:162200.	0.738
LOC113585867	bicd1	ENSEEEP00000039278	ENSEEEP00000002317	CAP-Gly domain-containing protein.	Bicaudal D homolog 1a.	0.738
LOC113585867	bicd2	ENSEEEP00000039278	ENSEEEP00000000358	CAP-Gly domain-containing protein.	Bicaudal D homolog 2 (Drosophila).	0.738