(20 nodes) Monoubiquitinated histone H2A deubiquitination network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sgf29	SGF29 C-terminal domain-containing protein. (293 aa)
	LOC113575524	SCA7 domain-containing protein. (714 aa)
	taf10	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (191 aa)
	mysm1	Myb-like, SWIRM and MPN domains 1. (823 aa)
	ENSEEEP00000043065	SCA7 domain-containing protein. (282 aa)
	taf5	Uncharacterized protein. (742 aa)
	bap1	Ubiquitin carboxyl-terminal hydrolase. (759 aa)
	TADA1	Transcriptional adaptor 1. (176 aa)
	supt3h	Uncharacterized protein. (375 aa)
	atxn7l2	Ataxin 7-like 2a. (726 aa)
	Trrap	Uncharacterized protein. (540 aa)
	atxn7	Ataxin 7. (824 aa)
	taf6	TAF domain-containing protein. (652 aa)
	taf12	TFIID_20kDa domain-containing protein. (162 aa)
	supt7l	BTP domain-containing protein. (424 aa)
	LOC113582975	Uncharacterized protein. (351 aa)
	LOC113591505	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (374 aa)
	sf3b5	Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
	taf6l	TAF domain-containing protein. (634 aa)
	LOC113579649	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (548 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000043065	LOC113579649	ENSEEEP00000043065	ENSEEEP00000035805	SCA7 domain-containing protein.	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.	0.752
ENSEEEP00000043065	LOC113582975	ENSEEEP00000043065	ENSEEEP00000051638	SCA7 domain-containing protein.	Uncharacterized protein.	0.493
ENSEEEP00000043065	LOC113591505	ENSEEEP00000043065	ENSEEEP00000012165	SCA7 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.814
ENSEEEP00000043065	TADA1	ENSEEEP00000043065	ENSEEEP00000021952	SCA7 domain-containing protein.	Transcriptional adaptor 1.	0.493
ENSEEEP00000043065	Trrap	ENSEEEP00000043065	ENSEEEP00000019738	SCA7 domain-containing protein.	Uncharacterized protein.	0.814
ENSEEEP00000043065	sf3b5	ENSEEEP00000043065	ENSEEEP00000007499	SCA7 domain-containing protein.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.550
ENSEEEP00000043065	sgf29	ENSEEEP00000043065	ENSEEEP00000005471	SCA7 domain-containing protein.	SGF29 C-terminal domain-containing protein.	0.832
ENSEEEP00000043065	supt3h	ENSEEEP00000043065	ENSEEEP00000020288	SCA7 domain-containing protein.	Uncharacterized protein.	0.868
ENSEEEP00000043065	supt7l	ENSEEEP00000043065	ENSEEEP00000012322	SCA7 domain-containing protein.	BTP domain-containing protein.	0.676
ENSEEEP00000043065	taf10	ENSEEEP00000043065	ENSEEEP00000028724	SCA7 domain-containing protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.923
ENSEEEP00000043065	taf12	ENSEEEP00000043065	ENSEEEP00000013445	SCA7 domain-containing protein.	TFIID_20kDa domain-containing protein.	0.894
ENSEEEP00000043065	taf5	ENSEEEP00000043065	ENSEEEP00000043399	SCA7 domain-containing protein.	Uncharacterized protein.	0.752
ENSEEEP00000043065	taf6	ENSEEEP00000043065	ENSEEEP00000014764	SCA7 domain-containing protein.	TAF domain-containing protein.	0.869
ENSEEEP00000043065	taf6l	ENSEEEP00000043065	ENSEEEP00000042393	SCA7 domain-containing protein.	TAF domain-containing protein.	0.797
LOC113575524	LOC113579649	ENSEEEP00000029143	ENSEEEP00000035805	SCA7 domain-containing protein.	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.	0.752
LOC113575524	LOC113582975	ENSEEEP00000029143	ENSEEEP00000051638	SCA7 domain-containing protein.	Uncharacterized protein.	0.493
LOC113575524	LOC113591505	ENSEEEP00000029143	ENSEEEP00000012165	SCA7 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.814
LOC113575524	TADA1	ENSEEEP00000029143	ENSEEEP00000021952	SCA7 domain-containing protein.	Transcriptional adaptor 1.	0.493
LOC113575524	Trrap	ENSEEEP00000029143	ENSEEEP00000019738	SCA7 domain-containing protein.	Uncharacterized protein.	0.814
LOC113575524	sf3b5	ENSEEEP00000029143	ENSEEEP00000007499	SCA7 domain-containing protein.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.526