(11 nodes) Nuclear pore nuclear basket network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113585134	Translocated promoter region b, nuclear basket protein. (2308 aa)
	nup153	Nucleoporin 153. (1466 aa)
	LOC113587944	Translocated promoter region a, nuclear basket protein. (2292 aa)
	nup98	Nucleoporin 98. (1811 aa)
	gcc2	Uncharacterized protein. (2844 aa)
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (336 aa)
	mcm3ap	Minichromosome maintenance complex component 3 associated protein. (1975 aa)
	ENSEEEP00000024560	Uncharacterized protein. (402 aa)
	mad1l1	Uncharacterized protein. (715 aa)
	cetn3	Uncharacterized protein. (167 aa)
	mad2l1	HORMA domain-containing protein. (202 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000024560	LOC113585134	ENSEEEP00000024560	ENSEEEP00000026080	Uncharacterized protein.	Translocated promoter region b, nuclear basket protein.	0.970
ENSEEEP00000024560	LOC113587944	ENSEEEP00000024560	ENSEEEP00000040506	Uncharacterized protein.	Translocated promoter region a, nuclear basket protein.	0.970
ENSEEEP00000024560	gcc2	ENSEEEP00000024560	ENSEEEP00000045492	Uncharacterized protein.	Uncharacterized protein.	0.514
ENSEEEP00000024560	mad2l1	ENSEEEP00000024560	ENSEEEP00000008203	Uncharacterized protein.	HORMA domain-containing protein.	0.962
ENSEEEP00000024560	nup153	ENSEEEP00000024560	ENSEEEP00000033882	Uncharacterized protein.	Nucleoporin 153.	0.992
ENSEEEP00000024560	nup35	ENSEEEP00000024560	ENSEEEP00000045538	Uncharacterized protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.991
ENSEEEP00000024560	nup98	ENSEEEP00000024560	ENSEEEP00000040966	Uncharacterized protein.	Nucleoporin 98.	0.996
LOC113585134	ENSEEEP00000024560	ENSEEEP00000026080	ENSEEEP00000024560	Translocated promoter region b, nuclear basket protein.	Uncharacterized protein.	0.970
LOC113585134	LOC113587944	ENSEEEP00000026080	ENSEEEP00000040506	Translocated promoter region b, nuclear basket protein.	Translocated promoter region a, nuclear basket protein.	0.903
LOC113585134	cetn3	ENSEEEP00000026080	ENSEEEP00000004279	Translocated promoter region b, nuclear basket protein.	Uncharacterized protein.	0.452
LOC113585134	gcc2	ENSEEEP00000026080	ENSEEEP00000045492	Translocated promoter region b, nuclear basket protein.	Uncharacterized protein.	0.970
LOC113585134	mad1l1	ENSEEEP00000026080	ENSEEEP00000025702	Translocated promoter region b, nuclear basket protein.	Uncharacterized protein.	0.605
LOC113585134	mad2l1	ENSEEEP00000026080	ENSEEEP00000008203	Translocated promoter region b, nuclear basket protein.	HORMA domain-containing protein.	0.438
LOC113585134	mcm3ap	ENSEEEP00000026080	ENSEEEP00000002844	Translocated promoter region b, nuclear basket protein.	Minichromosome maintenance complex component 3 associated protein.	0.515
LOC113585134	nup153	ENSEEEP00000026080	ENSEEEP00000033882	Translocated promoter region b, nuclear basket protein.	Nucleoporin 153.	0.936
LOC113585134	nup35	ENSEEEP00000026080	ENSEEEP00000045538	Translocated promoter region b, nuclear basket protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.751
LOC113585134	nup98	ENSEEEP00000026080	ENSEEEP00000040966	Translocated promoter region b, nuclear basket protein.	Nucleoporin 98.	0.915
LOC113587944	ENSEEEP00000024560	ENSEEEP00000040506	ENSEEEP00000024560	Translocated promoter region a, nuclear basket protein.	Uncharacterized protein.	0.970
LOC113587944	LOC113585134	ENSEEEP00000040506	ENSEEEP00000026080	Translocated promoter region a, nuclear basket protein.	Translocated promoter region b, nuclear basket protein.	0.903
LOC113587944	cetn3	ENSEEEP00000040506	ENSEEEP00000004279	Translocated promoter region a, nuclear basket protein.	Uncharacterized protein.	0.452