(33 nodes) Oocyte development network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSEEEP00000015065	Si:dkeyp-93d12.1. (993 aa)
	ENSEEEP00000016690	Phospholipase D family, member 6. (207 aa)
	LOC113571561	Dynactin 2 (p50). (375 aa)
	LOC113582267	Breast cancer 2, early onset. (2391 aa)
	ccnb1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (396 aa)
	dmc1	DNA meiotic recombinase 1. (324 aa)
	wdr77	WD_REPEATS_REGION domain-containing protein. (322 aa)
	ENSEEEP00000026468	Uncharacterized protein. (576 aa)
	ENSEEEP00000032310	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (3024 aa)
	Meioc	Uncharacterized protein. (221 aa)
	rec8	REC8 meiotic recombination protein b. (439 aa)
	tdrkh	Tudor and KH domain containing. (531 aa)
	tdrd5	Uncharacterized protein. (793 aa)
	YTHDC2	YTH domain containing 2. (1415 aa)
	mthfsd	RRM domain-containing protein. (425 aa)
	LOC113583538	Tudor domain containing 7 a. (1029 aa)
	ybx1	CSD_1 domain-containing protein. (312 aa)
	LOC113573495	Tudor domain containing 7 b. (1091 aa)
	ENSEEEP00000045309	Luteinizing hormone, beta polypeptide. (138 aa)
	Gdf9	Growth differentiation factor 9. (431 aa)
	mettl3	Methyltransferase like 3; Belongs to the MT-A70-like family. (582 aa)
	ENSEEEP00000002117	Endothelin 1. (99 aa)
	LOC113567708	YTH N(6)-methyladenosine RNA binding protein 2. (587 aa)
	LOC113571995	Bucky ball. (641 aa)
	henmt1	HEN methyltransferase 1. (406 aa)
	LOC113570313	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (459 aa)
	ENSEEEP00000009528	Zinc finger, GATA-like protein 1. (312 aa)
	TUT4	Terminal uridylyl transferase 4. (1333 aa)
	LOC113581051	Uncharacterized protein. (352 aa)
	tdrd1	Tudor domain containing 1. (1062 aa)
	ENSEEEP00000013063	Tudor domain containing 6. (1876 aa)
	LOC113572226	Uncharacterized protein. (354 aa)
	ednra	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (435 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000002117	LOC113570313	ENSEEEP00000002117	ENSEEEP00000005786	Endothelin 1.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.996
ENSEEEP00000002117	ednra	ENSEEEP00000002117	ENSEEEP00000020957	Endothelin 1.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.997
ENSEEEP00000009528	henmt1	ENSEEEP00000009528	ENSEEEP00000004546	Zinc finger, GATA-like protein 1.	HEN methyltransferase 1.	0.513
ENSEEEP00000013063	LOC113571995	ENSEEEP00000013063	ENSEEEP00000000090	Tudor domain containing 6.	Bucky ball.	0.506
ENSEEEP00000013063	tdrkh	ENSEEEP00000013063	ENSEEEP00000033723	Tudor domain containing 6.	Tudor and KH domain containing.	0.558
ENSEEEP00000015065	tdrkh	ENSEEEP00000015065	ENSEEEP00000033723	Si:dkeyp-93d12.1.	Tudor and KH domain containing.	0.558
ENSEEEP00000016690	LOC113573495	ENSEEEP00000016690	ENSEEEP00000041598	Phospholipase D family, member 6.	Tudor domain containing 7 b.	0.471
ENSEEEP00000016690	LOC113583538	ENSEEEP00000016690	ENSEEEP00000037191	Phospholipase D family, member 6.	Tudor domain containing 7 a.	0.471
ENSEEEP00000016690	henmt1	ENSEEEP00000016690	ENSEEEP00000004546	Phospholipase D family, member 6.	HEN methyltransferase 1.	0.649
ENSEEEP00000016690	tdrd1	ENSEEEP00000016690	ENSEEEP00000012274	Phospholipase D family, member 6.	Tudor domain containing 1.	0.577
ENSEEEP00000016690	tdrd5	ENSEEEP00000016690	ENSEEEP00000035634	Phospholipase D family, member 6.	Uncharacterized protein.	0.572
ENSEEEP00000016690	tdrkh	ENSEEEP00000016690	ENSEEEP00000033723	Phospholipase D family, member 6.	Tudor and KH domain containing.	0.600
ENSEEEP00000032310	LOC113582267	ENSEEEP00000032310	ENSEEEP00000018632	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	Breast cancer 2, early onset.	0.890
ENSEEEP00000032310	dmc1	ENSEEEP00000032310	ENSEEEP00000021955	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	DNA meiotic recombinase 1.	0.804
LOC113567708	YTHDC2	ENSEEEP00000002866	ENSEEEP00000036038	YTH N(6)-methyladenosine RNA binding protein 2.	YTH domain containing 2.	0.423
LOC113567708	mettl3	ENSEEEP00000002866	ENSEEEP00000001113	YTH N(6)-methyladenosine RNA binding protein 2.	Methyltransferase like 3; Belongs to the MT-A70-like family.	0.491
LOC113570313	ENSEEEP00000002117	ENSEEEP00000005786	ENSEEEP00000002117	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Endothelin 1.	0.996
LOC113570313	ednra	ENSEEEP00000005786	ENSEEEP00000020957	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.902
LOC113571995	ENSEEEP00000013063	ENSEEEP00000000090	ENSEEEP00000013063	Bucky ball.	Tudor domain containing 6.	0.506
LOC113573495	ENSEEEP00000016690	ENSEEEP00000041598	ENSEEEP00000016690	Tudor domain containing 7 b.	Phospholipase D family, member 6.	0.471