(42 nodes) Establishment of chromosome localization network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ndel1	NUDE_C domain-containing protein. (342 aa)
	cul3	Cullin 3; Belongs to the cullin family. (734 aa)
	ENSEEEP00000025773	Uncharacterized protein. (288 aa)
	mad1l1	Uncharacterized protein. (715 aa)
	fam83d	Family with sequence similarity 83, member D. (542 aa)
	ccnb1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (396 aa)
	vps4b	Uncharacterized protein; Belongs to the AAA ATPase family. (528 aa)
	pibf1	Progesterone immunomodulatory binding factor 1. (721 aa)
	LOC113576381	Uncharacterized protein. (258 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (361 aa)
	ENSEEEP00000049623	Uncharacterized protein. (81 aa)
	spice1	Spindle and centriole associated protein 1. (604 aa)
	LOC113590894	Uncharacterized protein; Belongs to the AAA ATPase family. (436 aa)
	ENSEEEP00000043170	Uncharacterized protein. (242 aa)
	LOC113572820	NUDE_C domain-containing protein. (350 aa)
	cdt1	Chromatin licensing and DNA replication factor 1. (679 aa)
	terb2	Telomere repeat binding bouquet formation protein 2. (184 aa)
	kif18a	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (899 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (466 aa)
	kpnb1	Importin N-terminal domain-containing protein. (915 aa)
	LOC113579076	Uncharacterized protein. (296 aa)
	Meioc	Uncharacterized protein. (221 aa)
	ENSEEEP00000032310	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (3024 aa)
	nde1	NUDE_C domain-containing protein. (327 aa)
	spdl1	Protein Spindly; Required for the localization of dynein and dynactin to the mitotic kintochore. Dynein is believed to control the initial lateral interaction between the kinetochore and spindle microtubules and to facilitate the subsequent formation of end-on kinetochore-microtubule attachments mediated by the NDC80 complex; Belongs to the Spindly family. (573 aa)
	LOC113592334	CULLIN_2 domain-containing protein; Belongs to the cullin family. (560 aa)
	pinx1	PIN2 (TERF1) interacting telomerase inhibitor 1. (181 aa)
	trappc12	TPR_REGION domain-containing protein. (813 aa)
	nudc	CS domain-containing protein. (337 aa)
	nuf2	Uncharacterized protein. (454 aa)
	mlh1	DNA_mis_repair domain-containing protein. (724 aa)
	ndc80	DUF5595 domain-containing protein. (637 aa)
	spo11	SPO11 meiotic protein covalently bound to DSB. (368 aa)
	ENSEEEP00000014239	Uncharacterized protein. (333 aa)
	ENSEEEP00000014236	Uncharacterized protein. (328 aa)
	rmdn1	TPR_REGION domain-containing protein. (297 aa)
	LOC113567833	CULLIN_2 domain-containing protein; Belongs to the cullin family. (232 aa)
	mis12	Uncharacterized protein. (220 aa)
	zw10	Zw10 kinetochore protein. (763 aa)
	kif14	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1411 aa)
	cdca5	Uncharacterized protein. (260 aa)
	cdc23	TPR_REGION domain-containing protein. (596 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000014236	ENSEEEP00000049623	ENSEEEP00000014236	ENSEEEP00000049623	Uncharacterized protein.	Uncharacterized protein.	0.553
ENSEEEP00000014236	terb2	ENSEEEP00000014236	ENSEEEP00000039400	Uncharacterized protein.	Telomere repeat binding bouquet formation protein 2.	0.850
ENSEEEP00000014239	ENSEEEP00000049623	ENSEEEP00000014239	ENSEEEP00000049623	Uncharacterized protein.	Uncharacterized protein.	0.553
ENSEEEP00000014239	terb2	ENSEEEP00000014239	ENSEEEP00000039400	Uncharacterized protein.	Telomere repeat binding bouquet formation protein 2.	0.850
ENSEEEP00000025773	LOC113576381	ENSEEEP00000025773	ENSEEEP00000051937	Uncharacterized protein.	Uncharacterized protein.	0.642
ENSEEEP00000025773	LOC113579076	ENSEEEP00000025773	ENSEEEP00000034235	Uncharacterized protein.	Uncharacterized protein.	0.642
ENSEEEP00000025773	ccnb1	ENSEEEP00000025773	ENSEEEP00000020772	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.659
ENSEEEP00000025773	kif14	ENSEEEP00000025773	ENSEEEP00000008443	Uncharacterized protein.	Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.791
ENSEEEP00000025773	kif18a	ENSEEEP00000025773	ENSEEEP00000036663	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.963
ENSEEEP00000025773	ndc80	ENSEEEP00000025773	ENSEEEP00000016121	Uncharacterized protein.	DUF5595 domain-containing protein.	0.948
ENSEEEP00000025773	nudc	ENSEEEP00000025773	ENSEEEP00000017320	Uncharacterized protein.	CS domain-containing protein.	0.690
ENSEEEP00000025773	nuf2	ENSEEEP00000025773	ENSEEEP00000016477	Uncharacterized protein.	Uncharacterized protein.	0.950
ENSEEEP00000025773	zw10	ENSEEEP00000025773	ENSEEEP00000008869	Uncharacterized protein.	Zw10 kinetochore protein.	0.737
ENSEEEP00000032310	cdt1	ENSEEEP00000032310	ENSEEEP00000041412	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	Chromatin licensing and DNA replication factor 1.	0.404
ENSEEEP00000032310	mlh1	ENSEEEP00000032310	ENSEEEP00000016195	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	DNA_mis_repair domain-containing protein.	0.837
ENSEEEP00000032310	spo11	ENSEEEP00000032310	ENSEEEP00000014255	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	SPO11 meiotic protein covalently bound to DSB.	0.719
ENSEEEP00000043170	ccnb1	ENSEEEP00000043170	ENSEEEP00000020772	Uncharacterized protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.425
ENSEEEP00000043170	ndc80	ENSEEEP00000043170	ENSEEEP00000016121	Uncharacterized protein.	DUF5595 domain-containing protein.	0.483
ENSEEEP00000043170	nudc	ENSEEEP00000043170	ENSEEEP00000017320	Uncharacterized protein.	CS domain-containing protein.	0.615
ENSEEEP00000049623	ENSEEEP00000014236	ENSEEEP00000049623	ENSEEEP00000014236	Uncharacterized protein.	Uncharacterized protein.	0.553