STRINGSTRING
vps54 vps54 cln8 cln8 ndel1 ndel1 LOC113572820 LOC113572820
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vps54Vacuolar protein sorting 54 homolog (S. cerevisiae). (930 aa)
cln8TLC domain-containing protein. (281 aa)
ndel1NUDE_C domain-containing protein. (342 aa)
LOC113572820NUDE_C domain-containing protein. (350 aa)
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
Server load: medium (50%) [HD]