(16 nodes) Glial cell projection network (Electrophorus electricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pink1	Protein kinase domain-containing protein. (579 aa)
	AQP4	Aquaporin 4; Belongs to the MIP/aquaporin (TC 1.A.8) family. (315 aa)
	slc1a2	Amino acid transporter. (549 aa)
	crb2	Crumbs family member 2b. (1445 aa)
	slc7a11	Uncharacterized protein. (517 aa)
	ENSEEEP00000032502	WAS protein family, member 3a. (293 aa)
	sirt2	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (385 aa)
	fmr1	Uncharacterized protein. (587 aa)
	ENSEEEP00000035945	EGF-like domain-containing protein. (183 aa)
	LOC113579711	Amino acid transporter. (539 aa)
	ENSEEEP00000043332	Zgc:109889. (268 aa)
	ENSEEEP00000043625	Si:ch73-362m14.4. (253 aa)
	LOC113591474	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (283 aa)
	LOC113589280	Crumbs family member 1, photoreceptor morphogenesis associated. (1350 aa)
	wasf3	WH2 domain-containing protein. (482 aa)
	LOC113578117	Si:ch73-352p4.8. (483 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000043332	ENSEEEP00000043625	ENSEEEP00000043332	ENSEEEP00000043625	Zgc:109889.	Si:ch73-362m14.4.	0.901
ENSEEEP00000043332	wasf3	ENSEEEP00000043332	ENSEEEP00000047217	Zgc:109889.	WH2 domain-containing protein.	0.901
ENSEEEP00000043625	ENSEEEP00000043332	ENSEEEP00000043625	ENSEEEP00000043332	Si:ch73-362m14.4.	Zgc:109889.	0.901
ENSEEEP00000043625	wasf3	ENSEEEP00000043625	ENSEEEP00000047217	Si:ch73-362m14.4.	WH2 domain-containing protein.	0.901
LOC113578117	slc7a11	ENSEEEP00000051236	ENSEEEP00000031000	Si:ch73-352p4.8.	Uncharacterized protein.	0.902
pink1	sirt2	ENSEEEP00000003966	ENSEEEP00000033081	Protein kinase domain-containing protein.	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.	0.589
sirt2	pink1	ENSEEEP00000033081	ENSEEEP00000003966	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.	Protein kinase domain-containing protein.	0.589
slc7a11	LOC113578117	ENSEEEP00000031000	ENSEEEP00000051236	Uncharacterized protein.	Si:ch73-352p4.8.	0.902
wasf3	ENSEEEP00000043332	ENSEEEP00000047217	ENSEEEP00000043332	WH2 domain-containing protein.	Zgc:109889.	0.901
wasf3	ENSEEEP00000043625	ENSEEEP00000047217	ENSEEEP00000043625	WH2 domain-containing protein.	Si:ch73-362m14.4.	0.901