21 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dmc1	DNA meiotic recombinase 1. (324 aa)
	LOC113568250	RAD51 paralog C. (260 aa)
	LOC113569058	AAA_23 domain-containing protein. (469 aa)
	ENSEEEP00000007003	AAA_23 domain-containing protein. (53 aa)
	rad51d	RECA_2 domain-containing protein. (338 aa)
	msh4	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (894 aa)
	rad50	RAD50 homolog, double strand break repair protein. (1181 aa)
	mlh1	DNA_mis_repair domain-containing protein. (724 aa)
	xrcc3	RECA_2 domain-containing protein. (355 aa)
	rad51	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
	pms2	PMS1 homolog 2, mismatch repair system component. (832 aa)
	msh5	MutS homolog 5. (760 aa)
	msh3	MutS homolog 3 (E. coli). (1052 aa)
	LOC113589524	RECA_2 domain-containing protein. (121 aa)
	LOC113567536	Uncharacterized protein. (1086 aa)
	msh2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (939 aa)
	LOC113567594	Si:dkey-119f1.1. (1009 aa)
	XRCC2	RECA_2 domain-containing protein. (302 aa)
	mlh3	Uncharacterized protein. (1098 aa)
	msh6	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1371 aa)
	pms1	HMG box domain-containing protein. (915 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000007003	LOC113568250	ENSEEEP00000007003	ENSEEEP00000004244	AAA_23 domain-containing protein.	RAD51 paralog C.	0.671
ENSEEEP00000007003	LOC113589524	ENSEEEP00000007003	ENSEEEP00000028964	AAA_23 domain-containing protein.	RECA_2 domain-containing protein.	0.671
ENSEEEP00000007003	XRCC2	ENSEEEP00000007003	ENSEEEP00000039680	AAA_23 domain-containing protein.	RECA_2 domain-containing protein.	0.577
ENSEEEP00000007003	dmc1	ENSEEEP00000007003	ENSEEEP00000021955	AAA_23 domain-containing protein.	DNA meiotic recombinase 1.	0.645
ENSEEEP00000007003	rad51	ENSEEEP00000007003	ENSEEEP00000017370	AAA_23 domain-containing protein.	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.825
ENSEEEP00000007003	rad51d	ENSEEEP00000007003	ENSEEEP00000008581	AAA_23 domain-containing protein.	RECA_2 domain-containing protein.	0.751
ENSEEEP00000007003	xrcc3	ENSEEEP00000007003	ENSEEEP00000016330	AAA_23 domain-containing protein.	RECA_2 domain-containing protein.	0.713
LOC113567536	mlh1	ENSEEEP00000035482	ENSEEEP00000016195	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.425
LOC113567536	msh3	ENSEEEP00000035482	ENSEEEP00000028558	Uncharacterized protein.	MutS homolog 3 (E. coli).	0.421
LOC113567536	msh4	ENSEEEP00000035482	ENSEEEP00000012710	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.529
LOC113567536	msh6	ENSEEEP00000035482	ENSEEEP00000046345	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.428
LOC113567536	rad51	ENSEEEP00000035482	ENSEEEP00000017370	Uncharacterized protein.	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.714
LOC113567536	rad51d	ENSEEEP00000035482	ENSEEEP00000008581	Uncharacterized protein.	RECA_2 domain-containing protein.	0.603
LOC113567594	mlh1	ENSEEEP00000037992	ENSEEEP00000016195	Si:dkey-119f1.1.	DNA_mis_repair domain-containing protein.	0.425
LOC113567594	msh3	ENSEEEP00000037992	ENSEEEP00000028558	Si:dkey-119f1.1.	MutS homolog 3 (E. coli).	0.421
LOC113567594	msh4	ENSEEEP00000037992	ENSEEEP00000012710	Si:dkey-119f1.1.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.529
LOC113567594	msh6	ENSEEEP00000037992	ENSEEEP00000046345	Si:dkey-119f1.1.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.428
LOC113567594	rad51	ENSEEEP00000037992	ENSEEEP00000017370	Si:dkey-119f1.1.	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]	0.714
LOC113567594	rad51d	ENSEEEP00000037992	ENSEEEP00000008581	Si:dkey-119f1.1.	RECA_2 domain-containing protein.	0.603
LOC113568250	ENSEEEP00000007003	ENSEEEP00000004244	ENSEEEP00000007003	RAD51 paralog C.	AAA_23 domain-containing protein.	0.671