37 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	prkdc	Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4099 aa)
	fancd2	FA complementation group D2. (1261 aa)
	pms1	HMG box domain-containing protein. (915 aa)
	LOC113576847	RING-type domain-containing protein. (995 aa)
	msh6	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1371 aa)
	fanci	FA complementation group I. (1324 aa)
	xrcc4	Uncharacterized protein. (343 aa)
	xpc	Uncharacterized protein. (868 aa)
	xrcc5	Ku domain-containing protein. (740 aa)
	mlh3	Uncharacterized protein. (1098 aa)
	ercc1	Uncharacterized protein. (346 aa)
	LOC113575219	Uncharacterized protein. (287 aa)
	xpa	Xeroderma pigmentosum, complementation group A. (519 aa)
	msh2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (939 aa)
	ascc1	AKAP7_NLS domain-containing protein. (188 aa)
	ENSEEEP00000032310	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (3024 aa)
	xrcc1	X-ray repair complementing defective repair in Chinese hamster cells 1. (539 aa)
	msh3	MutS homolog 3 (E. coli). (1052 aa)
	lig4	DNA ligase. (909 aa)
	ercc8	WD_REPEATS_REGION domain-containing protein. (400 aa)
	xrcc6	Uncharacterized protein. (627 aa)
	phf21a	PHD finger protein 21Ab. (735 aa)
	ercc3	Uncharacterized protein. (823 aa)
	pms2	PMS1 homolog 2, mismatch repair system component. (832 aa)
	ercc4	ERCC4 domain-containing protein. (899 aa)
	ascc2	CUE domain-containing protein. (797 aa)
	ENSEEEP00000019120	PHD finger protein 21Aa. (769 aa)
	paxx	Uncharacterized protein. (192 aa)
	LOC113582267	Breast cancer 2, early onset. (2391 aa)
	kdm1a	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (859 aa)
	mlh1	DNA_mis_repair domain-containing protein. (724 aa)
	zswim7	SWIM-type domain-containing protein. (145 aa)
	dclre1c	DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae). (683 aa)
	ENSEEEP00000006834	Uncharacterized protein. (110 aa)
	pold1	DNA polymerase. (1061 aa)
	LOC113569381	Activating signal cointegrator 1 complex subunit 1-like. (170 aa)
	LOC113569379	KH domain-containing protein. (170 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000006834	ENSEEEP00000032310	ENSEEEP00000006834	ENSEEEP00000032310	Uncharacterized protein.	ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.	0.585
ENSEEEP00000006834	LOC113576847	ENSEEEP00000006834	ENSEEEP00000047536	Uncharacterized protein.	RING-type domain-containing protein.	0.567
ENSEEEP00000006834	LOC113582267	ENSEEEP00000006834	ENSEEEP00000018632	Uncharacterized protein.	Breast cancer 2, early onset.	0.449
ENSEEEP00000006834	dclre1c	ENSEEEP00000006834	ENSEEEP00000008266	Uncharacterized protein.	DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae).	0.426
ENSEEEP00000006834	ercc3	ENSEEEP00000006834	ENSEEEP00000022614	Uncharacterized protein.	Uncharacterized protein.	0.809
ENSEEEP00000006834	ercc4	ENSEEEP00000006834	ENSEEEP00000020903	Uncharacterized protein.	ERCC4 domain-containing protein.	0.973
ENSEEEP00000006834	ercc8	ENSEEEP00000006834	ENSEEEP00000024178	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.406
ENSEEEP00000006834	fancd2	ENSEEEP00000006834	ENSEEEP00000052150	Uncharacterized protein.	FA complementation group D2.	0.748
ENSEEEP00000006834	fanci	ENSEEEP00000006834	ENSEEEP00000046194	Uncharacterized protein.	FA complementation group I.	0.725
ENSEEEP00000006834	lig4	ENSEEEP00000006834	ENSEEEP00000024668	Uncharacterized protein.	DNA ligase.	0.504
ENSEEEP00000006834	mlh1	ENSEEEP00000006834	ENSEEEP00000016195	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.438
ENSEEEP00000006834	msh2	ENSEEEP00000006834	ENSEEEP00000035660	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.759
ENSEEEP00000006834	msh3	ENSEEEP00000006834	ENSEEEP00000028558	Uncharacterized protein.	MutS homolog 3 (E. coli).	0.575
ENSEEEP00000006834	msh6	ENSEEEP00000006834	ENSEEEP00000046345	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.621
ENSEEEP00000006834	pms1	ENSEEEP00000006834	ENSEEEP00000049386	Uncharacterized protein.	HMG box domain-containing protein.	0.428
ENSEEEP00000006834	pms2	ENSEEEP00000006834	ENSEEEP00000021207	Uncharacterized protein.	PMS1 homolog 2, mismatch repair system component.	0.455
ENSEEEP00000006834	pold1	ENSEEEP00000006834	ENSEEEP00000002302	Uncharacterized protein.	DNA polymerase.	0.454
ENSEEEP00000006834	xpa	ENSEEEP00000006834	ENSEEEP00000037230	Uncharacterized protein.	Xeroderma pigmentosum, complementation group A.	0.954
ENSEEEP00000006834	xpc	ENSEEEP00000006834	ENSEEEP00000044328	Uncharacterized protein.	Uncharacterized protein.	0.554
ENSEEEP00000006834	xrcc1	ENSEEEP00000006834	ENSEEEP00000030211	Uncharacterized protein.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.508