STRINGSTRING
ENSEEEP00000002114 ENSEEEP00000002114 sirt6 sirt6 LOC113590492 LOC113590492 pdcd2 pdcd2 LOC113573801 LOC113573801 kdm1a kdm1a PTPRC PTPRC cited1 cited1 LOC113592282 LOC113592282 ENSEEEP00000023535 ENSEEEP00000023535 ENSEEEP00000027523 ENSEEEP00000027523 ENSEEEP00000037429 ENSEEEP00000037429 fgf4 fgf4 atxn1l atxn1l LOC113588416 LOC113588416 vegfc vegfc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSEEEP00000002114Uncharacterized protein. (164 aa)
sirt6Deacetylase sirtuin-type domain-containing protein. (396 aa)
LOC113590492Transforming growth factor beta; Belongs to the TGF-beta family. (379 aa)
pdcd2MYND-type domain-containing protein. (356 aa)
LOC113573801Transforming growth factor beta; Belongs to the TGF-beta family. (379 aa)
kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (859 aa)
PTPRCProtein tyrosine phosphatase receptor type C. (720 aa)
cited1Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1. (145 aa)
LOC113592282Homeobox domain-containing protein. (269 aa)
ENSEEEP00000023535Uncharacterized protein; Belongs to the heparin-binding growth factors family. (76 aa)
ENSEEEP00000027523Uncharacterized protein. (179 aa)
ENSEEEP00000037429Uncharacterized protein. (115 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (191 aa)
atxn1lAtaxin 1-like. (635 aa)
LOC113588416Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (204 aa)
vegfcPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (403 aa)
Your Current Organism:
Electrophorus electricus
NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish
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