35 items (Electrophorus electricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113579003	F-box domain-containing protein. (442 aa)
	fbxo33	F-box domain-containing protein. (484 aa)
	FBXL14	F-box domain-containing protein. (400 aa)
	LOC113575584	F-box and WD repeat domain containing 11a. (540 aa)
	fbxo32	F-box domain-containing protein. (355 aa)
	fbxl19	Uncharacterized protein. (823 aa)
	usp47	Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family. (1375 aa)
	fbh1	F-box domain-containing protein. (1043 aa)
	tmem183a	Transmembrane protein 183A. (393 aa)
	fbxw5	Uncharacterized protein. (616 aa)
	fbxo4	F-box protein 4. (371 aa)
	ccnf	Cyclin F; Belongs to the cyclin family. (760 aa)
	fbxo9	F-box domain-containing protein. (424 aa)
	LOC113572008	F-box and leucine-rich repeat protein 7. (446 aa)
	fbxo31	F-box domain-containing protein. (573 aa)
	LOC113579745	F-box domain-containing protein. (400 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (135 aa)
	LOC113582595	F-box domain-containing protein. (445 aa)
	fbxo42	F-box protein 42. (735 aa)
	Fbxl22	F-box and leucine-rich repeat protein 22. (245 aa)
	LOC113575374	Zinc finger, C3HC-type containing 1. (277 aa)
	LOC113570348	Si:ch73-290k24.5. (717 aa)
	LOC113573723	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (103 aa)
	LOC113587211	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (76 aa)
	skp2	F-box domain-containing protein. (410 aa)
	fbxl5	F-box domain-containing protein. (725 aa)
	LOC113590515	Uncharacterized protein. (533 aa)
	Fbxl6	Uncharacterized protein. (219 aa)
	fbxo25	Uncharacterized protein. (356 aa)
	LOC113572613	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (79 aa)
	ENSEEEP00000015465	F-box domain-containing protein. (82 aa)
	LOC113583363	Leucine rich repeat containing 29. (628 aa)
	fbxl15	F-box domain-containing protein. (306 aa)
	fbxl17	F-box domain-containing protein. (629 aa)
	fbxo41	F-box protein 41. (783 aa)

Your Current Organism:

Electrophorus electricus

NCBI taxonomy Id: 8005
Other names: E. electricus, electric eel, electric knifefish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSEEEP00000015465	rbx1	ENSEEEP00000015465	ENSEEEP00000049513	F-box domain-containing protein.	Ring-box 1, E3 ubiquitin protein ligase.	0.814
ENSEEEP00000015465	skp2	ENSEEEP00000015465	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.469
FBXL14	fbxo25	ENSEEEP00000029595	ENSEEEP00000012089	F-box domain-containing protein.	Uncharacterized protein.	0.481
FBXL14	fbxo33	ENSEEEP00000029595	ENSEEEP00000027420	F-box domain-containing protein.	F-box domain-containing protein.	0.420
FBXL14	fbxo9	ENSEEEP00000029595	ENSEEEP00000045290	F-box domain-containing protein.	F-box domain-containing protein.	0.415
FBXL14	fbxw5	ENSEEEP00000029595	ENSEEEP00000042658	F-box domain-containing protein.	Uncharacterized protein.	0.462
FBXL14	rbx1	ENSEEEP00000029595	ENSEEEP00000049513	F-box domain-containing protein.	Ring-box 1, E3 ubiquitin protein ligase.	0.755
FBXL14	skp2	ENSEEEP00000029595	ENSEEEP00000005980	F-box domain-containing protein.	F-box domain-containing protein.	0.547
Fbxl22	fbxl15	ENSEEEP00000002493	ENSEEEP00000016038	F-box and leucine-rich repeat protein 22.	F-box domain-containing protein.	0.400
Fbxl22	rbx1	ENSEEEP00000002493	ENSEEEP00000049513	F-box and leucine-rich repeat protein 22.	Ring-box 1, E3 ubiquitin protein ligase.	0.552
Fbxl6	rbx1	ENSEEEP00000011534	ENSEEEP00000049513	Uncharacterized protein.	Ring-box 1, E3 ubiquitin protein ligase.	0.814
Fbxl6	skp2	ENSEEEP00000011534	ENSEEEP00000005980	Uncharacterized protein.	F-box domain-containing protein.	0.469
LOC113570348	rbx1	ENSEEEP00000005255	ENSEEEP00000049513	Si:ch73-290k24.5.	Ring-box 1, E3 ubiquitin protein ligase.	0.479
LOC113572008	rbx1	ENSEEEP00000046085	ENSEEEP00000049513	F-box and leucine-rich repeat protein 7.	Ring-box 1, E3 ubiquitin protein ligase.	0.814
LOC113572008	skp2	ENSEEEP00000046085	ENSEEEP00000005980	F-box and leucine-rich repeat protein 7.	F-box domain-containing protein.	0.469
LOC113572613	ccnf	ENSEEEP00000013242	ENSEEEP00000045267	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Cyclin F; Belongs to the cyclin family.	0.714
LOC113572613	rbx1	ENSEEEP00000013242	ENSEEEP00000049513	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Ring-box 1, E3 ubiquitin protein ligase.	0.494
LOC113572613	skp2	ENSEEEP00000013242	ENSEEEP00000005980	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	F-box domain-containing protein.	0.932
LOC113573723	ccnf	ENSEEEP00000005308	ENSEEEP00000045267	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Cyclin F; Belongs to the cyclin family.	0.714
LOC113573723	rbx1	ENSEEEP00000005308	ENSEEEP00000049513	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Ring-box 1, E3 ubiquitin protein ligase.	0.494